Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SNORA4.2-201ENST00000365313 147 ntBASIC1.81□□□□□ -2.12
CDH12P55289 RNU6-144P-201ENST00000383951 107 ntBASIC1.81□□□□□ -2.12
CDH12P55289 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
CDH12P55289 RNU6-383P-201ENST00000410864 94 ntBASIC1.81□□□□□ -2.12
CDH12P55289 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
CDH12P55289 RNU6-437P-201ENST00000459408 95 ntBASIC1.81□□□□□ -2.12
CDH12P55289 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
CDH12P55289 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
CDH12P55289 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH12P55289 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
CDH12P55289 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDH12P55289 Y_RNA.111-201ENST00000363248 100 ntBASIC1.8□□□□□ -2.12
CDH12P55289 RNU6-923P-201ENST00000364753 107 ntBASIC1.8□□□□□ -2.12
CDH12P55289 Y_RNA.308-201ENST00000365043 101 ntBASIC1.8□□□□□ -2.12
CDH12P55289 MIR520A-201ENST00000384862 85 ntBASIC1.8□□□□□ -2.12
CDH12P55289 RNU6-907P-201ENST00000390924 102 ntBASIC1.8□□□□□ -2.12
CDH12P55289 SNORA3.2-201ENST00000408221 125 ntBASIC1.8□□□□□ -2.12
CDH12P55289 MIR1278-201ENST00000408753 81 ntBASIC1.8□□□□□ -2.12
CDH12P55289 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
CDH12P55289 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH12P55289 AL445646.1-201ENST00000431784 216 ntBASIC1.8□□□□□ -2.12
CDH12P55289 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDH12P55289 SNORA31.10-201ENST00000516482 106 ntBASIC1.8□□□□□ -2.12
CDH12P55289 Y_RNA.802-201ENST00000614892 130 ntBASIC1.8□□□□□ -2.12
CDH12P55289 AL590808.1-201ENST00000618696 141 ntBASIC1.8□□□□□ -2.12
CDH12P55289 MIR8054-201ENST00000620877 86 ntBASIC1.8□□□□□ -2.12
CDH12P55289 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDH12P55289 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
CDH12P55289 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDH12P55289 Y_RNA.24-201ENST00000362508 103 ntBASIC1.79□□□□□ -2.12
CDH12P55289 RNU6-674P-201ENST00000363831 107 ntBASIC1.79□□□□□ -2.12
CDH12P55289 MIR626-201ENST00000385032 94 ntBASIC1.79□□□□□ -2.12
CDH12P55289 MIR526A2-201ENST00000390198 65 ntBASIC1.79□□□□□ -2.12
CDH12P55289 RNU6-493P-201ENST00000391321 108 ntBASIC1.79□□□□□ -2.12
CDH12P55289 RNA5SP425-201ENST00000410336 112 ntBASIC1.79□□□□□ -2.12
CDH12P55289 RNU2-2P-201ENST00000410396 191 ntBASIC1.79□□□□□ -2.12
CDH12P55289 RN7SKP223-201ENST00000410582 62 ntBASIC1.79□□□□□ -2.12
CDH12P55289 Y_RNA.621-201ENST00000411065 96 ntBASIC1.79□□□□□ -2.12
CDH12P55289 HSPE1P9-201ENST00000440046 311 ntBASIC1.79□□□□□ -2.12
CDH12P55289 AC069257.2-201ENST00000441819 155 ntBASIC1.79□□□□□ -2.12
CDH12P55289 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH12P55289 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH12P55289 AL358944.1-201ENST00000528537 144 ntBASIC1.79□□□□□ -2.12
CDH12P55289 MIR4308-201ENST00000580634 81 ntBASIC1.79□□□□□ -2.12
CDH12P55289 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
CDH12P55289 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH12P55289 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDH12P55289 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDH12P55289 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CDH12P55289 Y_RNA.203-201ENST00000364106 102 ntBASIC1.78□□□□□ -2.12
CDH12P55289 snoU2_19.4-201ENST00000364329 80 ntBASIC1.78□□□□□ -2.12
CDH12P55289 RNU6-47P-201ENST00000383866 107 ntBASIC1.78□□□□□ -2.12
CDH12P55289 RNU6-969P-201ENST00000383900 105 ntBASIC1.78□□□□□ -2.12
CDH12P55289 SNORA8.3-201ENST00000384679 139 ntBASIC1.78□□□□□ -2.12
CDH12P55289 SNORA12.1-201ENST00000390873 148 ntBASIC1.78□□□□□ -2.12
CDH12P55289 RNU6-440P-201ENST00000390882 105 ntBASIC1.78□□□□□ -2.12
CDH12P55289 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
CDH12P55289 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH12P55289 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH12P55289 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.78□□□□□ -2.12
CDH12P55289 AP002004.2-201ENST00000531656 154 ntBASIC1.78□□□□□ -2.12
CDH12P55289 CBX3P4-201ENST00000538909 354 ntBASIC1.78□□□□□ -2.12
CDH12P55289 MIR4724-201ENST00000579485 89 ntBASIC1.78□□□□□ -2.12
CDH12P55289 AC078899.2-201ENST00000595282 212 ntBASIC1.78□□□□□ -2.12
CDH12P55289 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.78□□□□□ -2.12
CDH12P55289 AC064859.1-201ENST00000624741 174 ntBASIC1.78□□□□□ -2.12
CDH12P55289 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.78□□□□□ -2.12
CDH12P55289 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
CDH12P55289 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH12P55289 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH12P55289 MIR367-201ENST00000362299 68 ntBASIC1.77□□□□□ -2.13
CDH12P55289 MIR562-201ENST00000384894 95 ntBASIC1.77□□□□□ -2.13
CDH12P55289 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CDH12P55289 RNU6-381P-201ENST00000391259 108 ntBASIC1.77□□□□□ -2.13
CDH12P55289 AL158823.1-201ENST00000418441 478 ntBASIC1.77□□□□□ -2.13
CDH12P55289 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH12P55289 AL049830.1-201ENST00000468034 425 ntBASIC1.77□□□□□ -2.13
CDH12P55289 MIR3668-201ENST00000582138 75 ntBASIC1.77□□□□□ -2.13
CDH12P55289 MIR4435-1-201ENST00000582552 80 ntBASIC1.77□□□□□ -2.13
CDH12P55289 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
CDH12P55289 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDH12P55289 Y_RNA.796-201ENST00000364268 102 ntBASIC1.76□□□□□ -2.13
CDH12P55289 RNU4-41P-201ENST00000364426 143 ntBASIC1.76□□□□□ -2.13
CDH12P55289 Y_RNA.253-201ENST00000364562 112 ntBASIC1.76□□□□□ -2.13
CDH12P55289 Y_RNA.799-201ENST00000364992 102 ntBASIC1.76□□□□□ -2.13
CDH12P55289 RNU4-17P-201ENST00000365598 141 ntBASIC1.76□□□□□ -2.13
CDH12P55289 RNU6-918P-201ENST00000391219 106 ntBASIC1.76□□□□□ -2.13
CDH12P55289 AL512604.1-201ENST00000404812 257 ntBASIC1.76□□□□□ -2.13
CDH12P55289 RNU2-7P-201ENST00000410794 178 ntBASIC1.76□□□□□ -2.13
CDH12P55289 RNA5SP508-201ENST00000411327 119 ntBASIC1.76□□□□□ -2.13
CDH12P55289 COX6CP10-201ENST00000416832 224 ntBASIC1.76□□□□□ -2.13
CDH12P55289 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
CDH12P55289 MTND5P15-201ENST00000434246 349 ntBASIC1.76□□□□□ -2.13
CDH12P55289 Z98949.2-201ENST00000440996 144 ntBASIC1.76□□□□□ -2.13
CDH12P55289 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH12P55289 Y_RNA.644-201ENST00000459006 113 ntBASIC1.76□□□□□ -2.13
CDH12P55289 UBE2DNL-203ENST00000474922 222 ntBASIC1.76□□□□□ -2.13
CDH12P55289 SCARNA8-201ENST00000515924 131 ntBASIC1.76□□□□□ -2.13
CDH12P55289 Y_RNA.674-201ENST00000516362 113 ntBASIC1.76□□□□□ -2.13
CDH12P55289 RNU2-56P-201ENST00000516826 190 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms