Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 MIR520F-201ENST00000384824 87 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 MT-TN-201ENST00000387400 73 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.11□□□□□ -2.39
PSMD4P55036 Y_RNA.673-201ENST00000516306 88 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 RNU6-1088P-201ENST00000516850 104 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 RNU6-273P-201ENST00000516937 96 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 MIR6128-201ENST00000615528 109 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 AC090617.10-201ENST00000624308 134 ntBASIC0.11□□□□□ -2.39
PSMD4P55036 Y_RNA.148-201ENST00000363557 117 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 Y_RNA.358-201ENST00000365491 99 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 Y_RNA.368-201ENST00000365547 113 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.1□□□□□ -2.39
PSMD4P55036 SNRPGP12-201ENST00000449481 213 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 NDUFA4P2-201ENST00000489989 244 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 AC245008.1-201ENST00000608123 476 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 PVT1_3.1-201ENST00000620853 95 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 AC024614.3-201ENST00000637860 256 ntBASIC0.1□□□□□ -2.39
PSMD4P55036 Y_RNA.393-201ENST00000383936 102 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 AL031003.1-201ENST00000404229 172 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 RNU2-70P-201ENST00000410718 179 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 snoU13.21-201ENST00000459368 105 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 RNU6-977P-201ENST00000516411 103 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 RNU6-566P-201ENST00000516790 107 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 AC063944.3-201ENST00000609969 533 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 AC004467.1-201ENST00000615678 330 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.09□□□□□ -2.4
PSMD4P55036 MIR3662-201ENST00000637030 95 ntBASIC0.09□□□□□ -2.4
PSMD4P55036 Y_RNA.118-201ENST00000363300 101 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 RNA5SP62-201ENST00000363457 110 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 Y_RNA.172-201ENST00000363765 102 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 SNORD45.3-201ENST00000363836 72 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 MIR518A1-201ENST00000385068 85 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 RNU2-54P-201ENST00000410299 190 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 RNU2-61P-201ENST00000411069 191 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 RNU6-373P-201ENST00000411247 98 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 SNORD83.1-201ENST00000411362 77 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 SNRPGP10-201ENST00000432323 225 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 SNORA62.5-201ENST00000516634 120 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 Y_RNA.714-201ENST00000517065 90 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 RNU6-1314P-201ENST00000517139 104 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.08□□□□□ -2.4
PSMD4P55036 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.08□□□□□ -2.4
PSMD4P55036 AC022523.2-201ENST00000561045 150 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 AC011712.1-201ENST00000588959 234 ntBASIC0.08□□□□□ -2.4
PSMD4P55036 SNORA72-201ENST00000384339 132 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 RNU6-831P-201ENST00000384548 107 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 SNORD12B-201ENST00000410433 91 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 MTND4LP16-201ENST00000440828 295 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.07□□□□□ -2.4
PSMD4P55036 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.07□□□□□ -2.4
PSMD4P55036 RNU6-830P-201ENST00000516353 107 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.07□□□□□ -2.4
PSMD4P55036 AC018638.8-201ENST00000588755 281 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 AC023932.2-201ENST00000603176 175 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 AC018462.2-201ENST00000605375 395 ntBASIC0.07□□□□□ -2.4
PSMD4P55036 RNU6-1301P-201ENST00000362724 104 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 SNORD14E-201ENST00000364009 85 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 RNA5SP517-201ENST00000364724 117 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 RNU6-934P-201ENST00000365154 107 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 RNU6-1013P-201ENST00000384180 107 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 SNORD38C-201ENST00000384381 69 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 MIR613-201ENST00000385248 95 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 SNORA40.8-201ENST00000411034 126 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.06□□□□□ -2.4
PSMD4P55036 AC055872.1-201ENST00000570978 278 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 MIR548AO-201ENST00000579992 96 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 MIR4804-201ENST00000581683 73 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 AC005972.2-201ENST00000604690 348 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 AC078938.1-201ENST00000620993 318 ntBASIC0.06□□□□□ -2.4
PSMD4P55036 SNORA51.10-201ENST00000384418 136 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 RNY1P4-201ENST00000384595 115 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 MIR570-201ENST00000384917 97 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 RNU6-1148P-201ENST00000410992 104 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 SNORD71-201ENST00000411292 86 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 MTCO2P27-201ENST00000420740 428 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.05□□□□□ -2.4
PSMD4P55036 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.05□□□□□ -2.4
PSMD4P55036 AC011352.1-201ENST00000512300 793 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 AC026782.1-201ENST00000512952 449 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
PSMD4P55036 RNU6-408P-201ENST00000515910 100 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 SNORA25.12-201ENST00000516202 82 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 RNU6-1012P-201ENST00000516606 109 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 MIR4514-201ENST00000581410 57 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 AC006380.1-201ENST00000603598 186 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
PSMD4P55036 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
PSMD4P55036 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 Y_RNA.537-201ENST00000384626 109 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 MIR193B-201ENST00000384907 83 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 AC074085.1-201ENST00000413598 418 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 MTND2P22-201ENST00000444325 1033 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 MTND1P1-201ENST00000445453 368 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 CHEK2P4-201ENST00000450340 246 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 MIR4771-2-201ENST00000577758 74 ntBASIC0.04□□□□□ -2.4
PSMD4P55036 MIR4771-1-201ENST00000582617 74 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms