Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR520A-201ENST00000384862 85 ntBASIC2.1□□□□□ -2.07
COPAP53621 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
COPAP53621 AL139156.1-201ENST00000412785 841 ntBASIC2.1□□□□□ -2.07
COPAP53621 U8.19-201ENST00000459095 133 ntBASIC2.1□□□□□ -2.07
COPAP53621 AC117454.1-201ENST00000491120 168 ntBASIC2.1□□□□□ -2.07
COPAP53621 POLR3GP1-201ENST00000594073 261 ntBASIC2.1□□□□□ -2.07
COPAP53621 AC013791.1-201ENST00000616619 62 ntBASIC2.1□□□□□ -2.07
COPAP53621 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
COPAP53621 AC018630.2-201ENST00000534866 2403 ntBASIC2.09□□□□□ -2.07
COPAP53621 RNU6-1205P-201ENST00000363625 106 ntBASIC2.09□□□□□ -2.07
COPAP53621 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
COPAP53621 U8.7-201ENST00000364940 136 ntBASIC2.09□□□□□ -2.07
COPAP53621 MIR562-201ENST00000384894 95 ntBASIC2.09□□□□□ -2.07
COPAP53621 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COPAP53621 SNORD116-28-201ENST00000516123 91 ntBASIC2.09□□□□□ -2.07
COPAP53621 RNU7-115P-201ENST00000516433 55 ntBASIC2.09□□□□□ -2.07
COPAP53621 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.09□□□□□ -2.07
COPAP53621 AC024405.2-202ENST00000532731 184 ntBASIC2.09□□□□□ -2.07
COPAP53621 MIR5692C2-201ENST00000577959 77 ntBASIC2.09□□□□□ -2.07
COPAP53621 MIR4713-201ENST00000582691 75 ntBASIC2.09□□□□□ -2.07
COPAP53621 AP003357.1-201ENST00000604497 148 ntBASIC2.09□□□□□ -2.07
COPAP53621 MIR6079-201ENST00000635807 62 ntBASIC2.09□□□□□ -2.07
COPAP53621 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.09□□□□□ -2.08
COPAP53621 RNU6-112P-201ENST00000363599 104 ntBASIC2.08□□□□□ -2.08
COPAP53621 RNY1-201ENST00000364228 113 ntBASIC2.08□□□□□ -2.08
COPAP53621 Y_RNA.293-201ENST00000364908 93 ntBASIC2.08□□□□□ -2.08
COPAP53621 RNA5SP109-201ENST00000391010 116 ntBASIC2.08□□□□□ -2.08
COPAP53621 RNA5SP100-201ENST00000410903 110 ntBASIC2.08□□□□□ -2.08
COPAP53621 RNA5SP59-201ENST00000410922 110 ntBASIC2.08□□□□□ -2.08
COPAP53621 AC108059.2-201ENST00000434626 151 ntBASIC2.08□□□□□ -2.08
COPAP53621 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
COPAP53621 AC091021.1-201ENST00000468051 388 ntBASIC2.08□□□□□ -2.08
COPAP53621 RPL23AP54-201ENST00000495129 419 ntBASIC2.08□□□□□ -2.08
COPAP53621 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.08□□□□□ -2.08
COPAP53621 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.08□□□□□ -2.08
COPAP53621 RNU6-1096P-201ENST00000517089 102 ntBASIC2.08□□□□□ -2.08
COPAP53621 RNU6-794P-201ENST00000517261 64 ntBASIC2.08□□□□□ -2.08
COPAP53621 AC009779.6-201ENST00000603972 165 ntBASIC2.08□□□□□ -2.08
COPAP53621 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.08□□□□□ -2.08
COPAP53621 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.08□□□□□ -2.08
COPAP53621 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.08□□□□□ -2.08
COPAP53621 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.08□□□□□ -2.08
COPAP53621 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COPAP53621 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COPAP53621 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COPAP53621 Y_RNA.200-201ENST00000364018 102 ntBASIC2.07□□□□□ -2.08
COPAP53621 Y_RNA.267-201ENST00000364679 109 ntBASIC2.07□□□□□ -2.08
COPAP53621 SNORA72-201ENST00000384339 132 ntBASIC2.07□□□□□ -2.08
COPAP53621 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.07□□□□□ -2.08
COPAP53621 MIR1298-201ENST00000408783 112 ntBASIC2.07□□□□□ -2.08
COPAP53621 RPS4XP11-201ENST00000446897 772 ntBASIC2.07□□□□□ -2.08
COPAP53621 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.07□□□□□ -2.08
COPAP53621 COX6CP14-201ENST00000469580 174 ntBASIC2.07□□□□□ -2.08
COPAP53621 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
COPAP53621 AC127455.1-201ENST00000565496 145 ntBASIC2.07□□□□□ -2.08
COPAP53621 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
COPAP53621 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COPAP53621 Y_RNA.199-201ENST00000364014 102 ntBASIC2.06□□□□□ -2.08
COPAP53621 RNA5SP99-201ENST00000364020 114 ntBASIC2.06□□□□□ -2.08
COPAP53621 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
COPAP53621 RNY4P28-201ENST00000365281 93 ntBASIC2.06□□□□□ -2.08
COPAP53621 RNU6-144P-201ENST00000383951 107 ntBASIC2.06□□□□□ -2.08
COPAP53621 RNU6-482P-201ENST00000391068 107 ntBASIC2.06□□□□□ -2.08
COPAP53621 SNORA36B-201ENST00000410438 131 ntBASIC2.06□□□□□ -2.08
COPAP53621 Y_RNA.621-201ENST00000411065 96 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC245047.3-201ENST00000429428 127 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC233266.1-201ENST00000454518 96 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.06□□□□□ -2.08
COPAP53621 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.06□□□□□ -2.08
COPAP53621 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC011604.1-201ENST00000545978 196 ntBASIC2.06□□□□□ -2.08
COPAP53621 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC022217.4-201ENST00000604389 163 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC242852.1-201ENST00000612151 96 ntBASIC2.06□□□□□ -2.08
COPAP53621 AC244015.1-201ENST00000622301 99 ntBASIC2.06□□□□□ -2.08
COPAP53621 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COPAP53621 Y_RNA.83-201ENST00000363005 113 ntBASIC2.05□□□□□ -2.08
COPAP53621 Y_RNA.262-201ENST00000364641 102 ntBASIC2.05□□□□□ -2.08
COPAP53621 Y_RNA.304-201ENST00000365011 112 ntBASIC2.05□□□□□ -2.08
COPAP53621 RNU6-296P-201ENST00000384608 107 ntBASIC2.05□□□□□ -2.08
COPAP53621 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
COPAP53621 Y_RNA.626-201ENST00000411288 95 ntBASIC2.05□□□□□ -2.08
COPAP53621 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
COPAP53621 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.05□□□□□ -2.08
COPAP53621 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
COPAP53621 RNU6-1291P-201ENST00000516591 104 ntBASIC2.05□□□□□ -2.08
COPAP53621 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
COPAP53621 SNORA44.1-201ENST00000517031 108 ntBASIC2.05□□□□□ -2.08
COPAP53621 RNA5SP437-201ENST00000517249 129 ntBASIC2.05□□□□□ -2.08
COPAP53621 MIR3668-201ENST00000582138 75 ntBASIC2.05□□□□□ -2.08
COPAP53621 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.05□□□□□ -2.08
COPAP53621 AC091178.2-201ENST00000584401 117 ntBASIC2.05□□□□□ -2.08
COPAP53621 AL365265.1-201ENST00000621045 234 ntBASIC2.05□□□□□ -2.08
COPAP53621 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COPAP53621 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COPAP53621 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
COPAP53621 SNORA31.17-201ENST00000516953 127 ntBASIC2.04□□□□□ -2.08
COPAP53621 AC100821.1-201ENST00000523153 2479 ntBASIC2.04□□□□□ -2.08
COPAP53621 MIR6845-201ENST00000613182 61 ntBASIC2.04□□□□□ -2.08
COPAP53621 Y_RNA.802-201ENST00000614892 130 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms