Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
NEK3P51956 MIR548AY-201ENST00000617669 107 ntBASIC1.85□□□□□ -2.11
NEK3P51956 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NEK3P51956 MIR126-201ENST00000362291 85 ntBASIC1.84□□□□□ -2.11
NEK3P51956 snoU2_19.2-201ENST00000363024 80 ntBASIC1.84□□□□□ -2.11
NEK3P51956 RNU6-1080P-201ENST00000383982 107 ntBASIC1.84□□□□□ -2.11
NEK3P51956 RNU6-514P-201ENST00000384208 107 ntBASIC1.84□□□□□ -2.11
NEK3P51956 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
NEK3P51956 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NEK3P51956 RNU6-1109P-201ENST00000391187 107 ntBASIC1.84□□□□□ -2.11
NEK3P51956 CALM2P4-201ENST00000430810 426 ntBASIC1.84□□□□□ -2.11
NEK3P51956 AC104332.1-201ENST00000440471 797 ntBASIC1.84□□□□□ -2.11
NEK3P51956 RPL39P38-201ENST00000467018 153 ntBASIC1.84□□□□□ -2.11
NEK3P51956 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.84□□□□□ -2.11
NEK3P51956 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.84□□□□□ -2.11
NEK3P51956 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
NEK3P51956 MIRLET7C-201ENST00000362160 84 ntBASIC1.83□□□□□ -2.12
NEK3P51956 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
NEK3P51956 SNORA72.4-201ENST00000384174 132 ntBASIC1.83□□□□□ -2.12
NEK3P51956 U8.16-201ENST00000391279 133 ntBASIC1.83□□□□□ -2.12
NEK3P51956 AC113618.1-201ENST00000416747 285 ntBASIC1.83□□□□□ -2.12
NEK3P51956 CYCSP49-201ENST00000420810 319 ntBASIC1.83□□□□□ -2.12
NEK3P51956 MTCO1P5-201ENST00000433573 344 ntBASIC1.83□□□□□ -2.12
NEK3P51956 HMGN1P7-201ENST00000491722 313 ntBASIC1.83□□□□□ -2.12
NEK3P51956 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.83□□□□□ -2.12
NEK3P51956 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
NEK3P51956 AC024405.2-202ENST00000532731 184 ntBASIC1.83□□□□□ -2.12
NEK3P51956 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
NEK3P51956 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
NEK3P51956 AL591926.4-201ENST00000616895 298 ntBASIC1.83□□□□□ -2.12
NEK3P51956 AL353997.5-201ENST00000618886 171 ntBASIC1.83□□□□□ -2.12
NEK3P51956 AL121890.5-201ENST00000620848 304 ntBASIC1.83□□□□□ -2.12
NEK3P51956 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
NEK3P51956 SNORA25.1-201ENST00000362326 128 ntBASIC1.82□□□□□ -2.12
NEK3P51956 RNU6-199P-201ENST00000362954 107 ntBASIC1.82□□□□□ -2.12
NEK3P51956 RNU6-713P-201ENST00000384761 107 ntBASIC1.82□□□□□ -2.12
NEK3P51956 MIR606-201ENST00000384851 96 ntBASIC1.82□□□□□ -2.12
NEK3P51956 AL135790.2-201ENST00000437701 267 ntBASIC1.82□□□□□ -2.12
NEK3P51956 RNU7-12P-201ENST00000516030 62 ntBASIC1.82□□□□□ -2.12
NEK3P51956 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
NEK3P51956 MIR2681-201ENST00000581814 105 ntBASIC1.82□□□□□ -2.12
NEK3P51956 AL512605.2-201ENST00000592972 256 ntBASIC1.82□□□□□ -2.12
NEK3P51956 AC007742.2-201ENST00000618226 398 ntBASIC1.82□□□□□ -2.12
NEK3P51956 U6.104-201ENST00000637979 90 ntBASIC1.82□□□□□ -2.12
NEK3P51956 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.82□□□□□ -2.12
NEK3P51956 Y_RNA.64-201ENST00000362845 102 ntBASIC1.81□□□□□ -2.12
NEK3P51956 Y_RNA.253-201ENST00000364562 112 ntBASIC1.81□□□□□ -2.12
NEK3P51956 Y_RNA.541-201ENST00000384640 113 ntBASIC1.81□□□□□ -2.12
NEK3P51956 MIR891A-201ENST00000401237 79 ntBASIC1.81□□□□□ -2.12
NEK3P51956 RPL21P38-201ENST00000418090 167 ntBASIC1.81□□□□□ -2.12
NEK3P51956 MTND5P22-201ENST00000458380 195 ntBASIC1.81□□□□□ -2.12
NEK3P51956 RPL30P7-201ENST00000479312 323 ntBASIC1.81□□□□□ -2.12
NEK3P51956 RPS29P11-201ENST00000496507 171 ntBASIC1.81□□□□□ -2.12
NEK3P51956 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.81□□□□□ -2.12
NEK3P51956 AC087685.1-201ENST00000587507 141 ntBASIC1.81□□□□□ -2.12
NEK3P51956 AC120024.3-201ENST00000603167 156 ntBASIC1.81□□□□□ -2.12
NEK3P51956 SNORD68-201ENST00000363214 84 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RNU6-899P-201ENST00000363947 107 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RNA5SP99-201ENST00000364020 114 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RNU6-801P-201ENST00000364087 105 ntBASIC1.8□□□□□ -2.12
NEK3P51956 SNORA63C-201ENST00000364578 129 ntBASIC1.8□□□□□ -2.12
NEK3P51956 U8.7-201ENST00000364940 136 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RNU6-144P-201ENST00000383951 107 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.8□□□□□ -2.12
NEK3P51956 AC098869.1-201ENST00000481627 292 ntBASIC1.8□□□□□ -2.12
NEK3P51956 RPL23AP54-201ENST00000495129 419 ntBASIC1.8□□□□□ -2.12
NEK3P51956 AL513534.2-201ENST00000603836 250 ntBASIC1.8□□□□□ -2.12
NEK3P51956 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
NEK3P51956 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NEK3P51956 Y_RNA.84-201ENST00000363011 104 ntBASIC1.79□□□□□ -2.12
NEK3P51956 RNU6-674P-201ENST00000363831 107 ntBASIC1.79□□□□□ -2.12
NEK3P51956 Y_RNA.203-201ENST00000364106 102 ntBASIC1.79□□□□□ -2.12
NEK3P51956 RNU6-806P-201ENST00000365147 105 ntBASIC1.79□□□□□ -2.12
NEK3P51956 SNORA2.2-201ENST00000365473 135 ntBASIC1.79□□□□□ -2.12
NEK3P51956 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.79□□□□□ -2.12
NEK3P51956 RNU6-738P-201ENST00000384531 106 ntBASIC1.79□□□□□ -2.12
NEK3P51956 MIR653-201ENST00000385279 96 ntBASIC1.79□□□□□ -2.12
NEK3P51956 RNU7-141P-201ENST00000459304 62 ntBASIC1.79□□□□□ -2.12
NEK3P51956 AC117454.1-201ENST00000491120 168 ntBASIC1.79□□□□□ -2.12
NEK3P51956 RNU6-322P-201ENST00000516010 103 ntBASIC1.79□□□□□ -2.12
NEK3P51956 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
NEK3P51956 AL365434.2-201ENST00000607979 234 ntBASIC1.79□□□□□ -2.12
NEK3P51956 Y_RNA.242-201ENST00000364473 110 ntBASIC1.78□□□□□ -2.12
NEK3P51956 RNU6-163P-201ENST00000384396 106 ntBASIC1.78□□□□□ -2.12
NEK3P51956 MIR215-201ENST00000384858 110 ntBASIC1.78□□□□□ -2.12
NEK3P51956 MIR522-201ENST00000385071 87 ntBASIC1.78□□□□□ -2.12
NEK3P51956 RNU6-1203P-201ENST00000410703 110 ntBASIC1.78□□□□□ -2.12
NEK3P51956 RPS27P16-201ENST00000425758 201 ntBASIC1.78□□□□□ -2.12
NEK3P51956 DYNLT3P2-201ENST00000442517 295 ntBASIC1.78□□□□□ -2.12
NEK3P51956 RNU6-1007P-201ENST00000516586 107 ntBASIC1.78□□□□□ -2.12
NEK3P51956 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
NEK3P51956 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
NEK3P51956 RNU6-969P-201ENST00000383900 105 ntBASIC1.77□□□□□ -2.13
NEK3P51956 RNU6-131P-201ENST00000391144 107 ntBASIC1.77□□□□□ -2.13
NEK3P51956 AL627390.1-201ENST00000396055 340 ntBASIC1.77□□□□□ -2.13
NEK3P51956 SNRPGP10-201ENST00000432323 225 ntBASIC1.77□□□□□ -2.13
NEK3P51956 HMGN2P32-201ENST00000444648 269 ntBASIC1.77□□□□□ -2.13
NEK3P51956 RNU6-437P-201ENST00000459408 95 ntBASIC1.77□□□□□ -2.13
NEK3P51956 SERF1AP1-201ENST00000514575 187 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms