Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF144AP50876 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF144AP50876 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 SNORD114-6-201ENST00000364393 72 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 SNORA27-201ENST00000384323 126 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 SNORD38C-201ENST00000384381 69 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 MIR592-201ENST00000384959 97 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 SNORA11-201ENST00000408789 128 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 MRPL35P3-201ENST00000421557 364 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 RN7SL636P-201ENST00000497504 294 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 AC023141.11-201ENST00000508864 202 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 AC034105.4-201ENST00000568304 277 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF144AP50876 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF144AP50876 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
RNF144AP50876 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
RNF144AP50876 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RNF144AP50876 Y_RNA.221-201ENST00000364248 96 ntBASIC3.28□□□□□ -1.88
RNF144AP50876 Y_RNA.241-201ENST00000364470 117 ntBASIC3.28□□□□□ -1.88
RNF144AP50876 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF144AP50876 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF144AP50876 CST2P1-201ENST00000425770 87 ntBASIC3.28□□□□□ -1.88
RNF144AP50876 YPEL5P2-201ENST00000605553 359 ntBASIC3.28□□□□□ -1.88
RNF144AP50876 AC095038.3-201ENST00000634439 195 ntBASIC3.28□□□□□ -1.88
RNF144AP50876 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF144AP50876 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF144AP50876 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF144AP50876 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF144AP50876 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF144AP50876 AC092435.3-201ENST00000565538 3654 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 Y_RNA.96-201ENST00000363092 109 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 RNU6-60P-201ENST00000364792 103 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 SNORD116-22-201ENST00000384430 92 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 SNORA7.5-201ENST00000410672 110 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 SRIP3-201ENST00000413200 219 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF144AP50876 BTF3P4-201ENST00000418852 495 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 AC006539.3-201ENST00000454258 129 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 AC025518.1-201ENST00000479856 347 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 SEM1P1-201ENST00000506694 209 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 MIR1254-2-201ENST00000579553 63 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 AC021613.1-201ENST00000623880 111 ntBASIC3.27□□□□□ -1.89
RNF144AP50876 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF144AP50876 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF144AP50876 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF144AP50876 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF144AP50876 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RNF144AP50876 AC096644.4-201ENST00000563417 2912 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
RNF144AP50876 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF144AP50876 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RNF144AP50876 Y_RNA.190-201ENST00000363964 101 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 SNORD45B-201ENST00000364617 72 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 Y_RNA.299-201ENST00000364973 94 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 SNORA62.3-201ENST00000365110 153 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 RNU6-402P-201ENST00000410678 103 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF144AP50876 RN7SL297P-201ENST00000483161 293 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 RNU2-27P-201ENST00000516185 142 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 MIR3922-201ENST00000585192 84 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.26□□□□□ -1.89
RNF144AP50876 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF144AP50876 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF144AP50876 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF144AP50876 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF144AP50876 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF144AP50876 RNU6-862P-201ENST00000362804 105 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 SNORA73.2-201ENST00000364946 201 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 SNORA5A-201ENST00000384111 134 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU6-675P-201ENST00000384236 104 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 AC245047.3-201ENST00000429428 127 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF144AP50876 RNU2-11P-201ENST00000459191 187 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 SNORA84-201ENST00000459229 133 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU7-96P-201ENST00000459535 64 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RPL23AP63-201ENST00000498752 471 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU6-998P-201ENST00000515894 101 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU1-95P-201ENST00000516357 160 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU1-128P-201ENST00000516704 160 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU7-28P-201ENST00000516759 62 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 RNU6-579P-201ENST00000516879 102 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 NDUFB9P3-201ENST00000521269 501 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 MIR4777-201ENST00000583710 86 ntBASIC3.25□□□□□ -1.89
RNF144AP50876 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF144AP50876 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF144AP50876 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF144AP50876 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 Y_RNA.99-201ENST00000363138 105 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 SNORA48.7-201ENST00000391302 135 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 ATP5A1P2-201ENST00000412323 255 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 AL133547.1-201ENST00000448546 220 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 AC114811.1-201ENST00000507207 168 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 ZNF861P-201ENST00000588126 639 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 uc_338.25-201ENST00000613756 156 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 AC091304.10-201ENST00000641554 121 ntBASIC3.24□□□□□ -1.89
RNF144AP50876 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RNF144AP50876 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms