Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 MIR634-201ENST00000385208 97 ntBASIC2.37□□□□□ -2.03
CLK3P49761 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.37□□□□□ -2.03
CLK3P49761 AL158147.1-201ENST00000443970 75 ntBASIC2.37□□□□□ -2.03
CLK3P49761 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
CLK3P49761 MIR2681-201ENST00000581814 105 ntBASIC2.37□□□□□ -2.03
CLK3P49761 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.37□□□□□ -2.03
CLK3P49761 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
CLK3P49761 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLK3P49761 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLK3P49761 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLK3P49761 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
CLK3P49761 U8.1-201ENST00000362843 134 ntBASIC2.36□□□□□ -2.03
CLK3P49761 RNU6-1240P-201ENST00000365155 104 ntBASIC2.36□□□□□ -2.03
CLK3P49761 RNU6-1336P-201ENST00000383886 109 ntBASIC2.36□□□□□ -2.03
CLK3P49761 SNORA40.5-201ENST00000391061 128 ntBASIC2.36□□□□□ -2.03
CLK3P49761 SNORD77.4-201ENST00000516158 81 ntBASIC2.36□□□□□ -2.03
CLK3P49761 RNU2-34P-201ENST00000516534 121 ntBASIC2.36□□□□□ -2.03
CLK3P49761 RNU6-667P-201ENST00000517186 102 ntBASIC2.36□□□□□ -2.03
CLK3P49761 MTND5P34-201ENST00000568888 325 ntBASIC2.36□□□□□ -2.03
CLK3P49761 AC131055.1-201ENST00000584626 316 ntBASIC2.36□□□□□ -2.03
CLK3P49761 AC097639.2-201ENST00000603159 172 ntBASIC2.36□□□□□ -2.03
CLK3P49761 uc_338.4-201ENST00000616635 176 ntBASIC2.36□□□□□ -2.03
CLK3P49761 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
CLK3P49761 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLK3P49761 AC062016.1-201ENST00000355719 319 ntBASIC2.35□□□□□ -2.03
CLK3P49761 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLK3P49761 RNU6-743P-201ENST00000364151 106 ntBASIC2.35□□□□□ -2.03
CLK3P49761 RNU2-70P-201ENST00000410718 179 ntBASIC2.35□□□□□ -2.03
CLK3P49761 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.35□□□□□ -2.03
CLK3P49761 AC023449.1-201ENST00000454464 154 ntBASIC2.35□□□□□ -2.03
CLK3P49761 AP001486.1-201ENST00000463339 476 ntBASIC2.35□□□□□ -2.03
CLK3P49761 RPS27P22-201ENST00000478056 241 ntBASIC2.35□□□□□ -2.03
CLK3P49761 RNU5E-3P-201ENST00000515913 68 ntBASIC2.35□□□□□ -2.03
CLK3P49761 AL929325.1-201ENST00000603096 117 ntBASIC2.35□□□□□ -2.03
CLK3P49761 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
CLK3P49761 MIR1248-201ENST00000629190 106 ntBASIC2.35□□□□□ -2.03
CLK3P49761 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CLK3P49761 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
CLK3P49761 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLK3P49761 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLK3P49761 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CLK3P49761 RNU6-1298P-201ENST00000362456 101 ntBASIC2.34□□□□□ -2.03
CLK3P49761 Y_RNA.114-201ENST00000363265 113 ntBASIC2.34□□□□□ -2.03
CLK3P49761 Y_RNA.203-201ENST00000364106 102 ntBASIC2.34□□□□□ -2.03
CLK3P49761 Y_RNA.634-201ENST00000364811 113 ntBASIC2.34□□□□□ -2.03
CLK3P49761 RNU6-438P-201ENST00000365561 103 ntBASIC2.34□□□□□ -2.03
CLK3P49761 SNORD18B-201ENST00000365659 72 ntBASIC2.34□□□□□ -2.03
CLK3P49761 SNORA22-201ENST00000383907 134 ntBASIC2.34□□□□□ -2.03
CLK3P49761 RNU6-418P-201ENST00000384035 107 ntBASIC2.34□□□□□ -2.03
CLK3P49761 RNU6-136P-201ENST00000384663 107 ntBASIC2.34□□□□□ -2.03
CLK3P49761 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
CLK3P49761 SNORA26-201ENST00000391286 122 ntBASIC2.34□□□□□ -2.03
CLK3P49761 AL603914.1-201ENST00000401964 204 ntBASIC2.34□□□□□ -2.03
CLK3P49761 RNU2-48P-201ENST00000410694 191 ntBASIC2.34□□□□□ -2.03
CLK3P49761 AC016909.1-201ENST00000415916 166 ntBASIC2.34□□□□□ -2.03
CLK3P49761 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
CLK3P49761 RNU6-126P-201ENST00000516685 103 ntBASIC2.34□□□□□ -2.03
CLK3P49761 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.34□□□□□ -2.03
CLK3P49761 AL033523.1-201ENST00000605153 153 ntBASIC2.34□□□□□ -2.03
CLK3P49761 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLK3P49761 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLK3P49761 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.04
CLK3P49761 Y_RNA.43-201ENST00000362670 111 ntBASIC2.33□□□□□ -2.04
CLK3P49761 RNU1-22P-201ENST00000363334 158 ntBASIC2.33□□□□□ -2.04
CLK3P49761 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
CLK3P49761 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
CLK3P49761 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
CLK3P49761 MLLT10P1-201ENST00000418346 262 ntBASIC2.33□□□□□ -2.04
CLK3P49761 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.33□□□□□ -2.04
CLK3P49761 SNORD11-201ENST00000459124 84 ntBASIC2.33□□□□□ -2.04
CLK3P49761 AL049873.1-201ENST00000480540 376 ntBASIC2.33□□□□□ -2.04
CLK3P49761 SNORA4.4-201ENST00000515921 135 ntBASIC2.33□□□□□ -2.04
CLK3P49761 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
CLK3P49761 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.33□□□□□ -2.04
CLK3P49761 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.33□□□□□ -2.04
CLK3P49761 AC133485.4-201ENST00000561835 220 ntBASIC2.33□□□□□ -2.04
CLK3P49761 RPL23AP91-201ENST00000569211 455 ntBASIC2.33□□□□□ -2.04
CLK3P49761 AC138907.4-201ENST00000570107 226 ntBASIC2.33□□□□□ -2.04
CLK3P49761 MIR4679-2-201ENST00000578358 77 ntBASIC2.33□□□□□ -2.04
CLK3P49761 MIR3613-201ENST00000579844 87 ntBASIC2.33□□□□□ -2.04
CLK3P49761 AL670379.3-201ENST00000605040 251 ntBASIC2.33□□□□□ -2.04
CLK3P49761 AC013412.1-201ENST00000610687 192 ntBASIC2.33□□□□□ -2.04
CLK3P49761 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.33□□□□□ -2.04
CLK3P49761 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CLK3P49761 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLK3P49761 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.32□□□□□ -2.04
CLK3P49761 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CLK3P49761 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
CLK3P49761 RNU6-647P-201ENST00000364243 107 ntBASIC2.32□□□□□ -2.04
CLK3P49761 MIR23A-201ENST00000385245 73 ntBASIC2.32□□□□□ -2.04
CLK3P49761 AC063976.4-201ENST00000421971 163 ntBASIC2.32□□□□□ -2.04
CLK3P49761 RPS4XP11-201ENST00000446897 772 ntBASIC2.32□□□□□ -2.04
CLK3P49761 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
CLK3P49761 AC097462.1-201ENST00000514125 324 ntBASIC2.32□□□□□ -2.04
CLK3P49761 RNU6-1061P-201ENST00000516530 99 ntBASIC2.32□□□□□ -2.04
CLK3P49761 MIR4662B-201ENST00000579498 81 ntBASIC2.32□□□□□ -2.04
CLK3P49761 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
CLK3P49761 AC108081.1-201ENST00000604358 221 ntBASIC2.32□□□□□ -2.04
CLK3P49761 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CLK3P49761 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms