Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 Y_RNA.562-201ENST00000384695 113 ntBASIC1.78□□□□□ -2.12
CENPAP49450 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CENPAP49450 RNU6-440P-201ENST00000390882 105 ntBASIC1.78□□□□□ -2.12
CENPAP49450 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
CENPAP49450 RNA5SP425-201ENST00000410336 112 ntBASIC1.78□□□□□ -2.12
CENPAP49450 Z98742.3-201ENST00000418637 326 ntBASIC1.78□□□□□ -2.12
CENPAP49450 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.78□□□□□ -2.12
CENPAP49450 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.78□□□□□ -2.12
CENPAP49450 Y_RNA.641-201ENST00000459414 105 ntBASIC1.78□□□□□ -2.12
CENPAP49450 Y_RNA.637-201ENST00000459424 114 ntBASIC1.78□□□□□ -2.12
CENPAP49450 RNU6-237P-201ENST00000515985 71 ntBASIC1.78□□□□□ -2.12
CENPAP49450 RNU7-115P-201ENST00000516433 55 ntBASIC1.78□□□□□ -2.12
CENPAP49450 SNORA44.1-201ENST00000517031 108 ntBASIC1.78□□□□□ -2.12
CENPAP49450 AP002004.2-201ENST00000531656 154 ntBASIC1.78□□□□□ -2.12
CENPAP49450 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.78□□□□□ -2.12
CENPAP49450 MIR3128-201ENST00000581957 66 ntBASIC1.78□□□□□ -2.12
CENPAP49450 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
CENPAP49450 AP003357.1-201ENST00000604497 148 ntBASIC1.78□□□□□ -2.12
CENPAP49450 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.78□□□□□ -2.12
CENPAP49450 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.78□□□□□ -2.12
CENPAP49450 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CENPAP49450 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CENPAP49450 SNORA1B-201ENST00000362535 133 ntBASIC1.77□□□□□ -2.13
CENPAP49450 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
CENPAP49450 Y_RNA.447-201ENST00000384184 113 ntBASIC1.77□□□□□ -2.13
CENPAP49450 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
CENPAP49450 RN7SKP200-201ENST00000410564 320 ntBASIC1.77□□□□□ -2.13
CENPAP49450 Y_RNA.618-201ENST00000410949 107 ntBASIC1.77□□□□□ -2.13
CENPAP49450 AL139156.1-201ENST00000412785 841 ntBASIC1.77□□□□□ -2.13
CENPAP49450 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.77□□□□□ -2.13
CENPAP49450 AL049830.1-201ENST00000468034 425 ntBASIC1.77□□□□□ -2.13
CENPAP49450 MIR4709-201ENST00000577272 72 ntBASIC1.77□□□□□ -2.13
CENPAP49450 AL929325.1-201ENST00000603096 117 ntBASIC1.77□□□□□ -2.13
CENPAP49450 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
CENPAP49450 AL078604.3-201ENST00000615580 211 ntBASIC1.77□□□□□ -2.13
CENPAP49450 AC100821.1-201ENST00000523153 2479 ntBASIC1.77□□□□□ -2.13
CENPAP49450 Y_RNA.65-201ENST00000362846 100 ntBASIC1.76□□□□□ -2.13
CENPAP49450 RNU6-1205P-201ENST00000363625 106 ntBASIC1.76□□□□□ -2.13
CENPAP49450 SNORA20.1-201ENST00000364790 130 ntBASIC1.76□□□□□ -2.13
CENPAP49450 Y_RNA.293-201ENST00000364908 93 ntBASIC1.76□□□□□ -2.13
CENPAP49450 RNU6-211P-201ENST00000384047 107 ntBASIC1.76□□□□□ -2.13
CENPAP49450 MIR504-201ENST00000385065 83 ntBASIC1.76□□□□□ -2.13
CENPAP49450 SNORA36B-201ENST00000410438 131 ntBASIC1.76□□□□□ -2.13
CENPAP49450 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.76□□□□□ -2.13
CENPAP49450 STAG3L5P-204ENST00000443759 179 ntBASIC1.76□□□□□ -2.13
CENPAP49450 snoU13.27-201ENST00000459278 104 ntBASIC1.76□□□□□ -2.13
CENPAP49450 snoU13.15-201ENST00000459407 104 ntBASIC1.76□□□□□ -2.13
CENPAP49450 snoU13.26-201ENST00000459452 105 ntBASIC1.76□□□□□ -2.13
CENPAP49450 SNORA31.10-201ENST00000516482 106 ntBASIC1.76□□□□□ -2.13
CENPAP49450 BX284668.6-201ENST00000606899 438 ntBASIC1.76□□□□□ -2.13
CENPAP49450 AC013791.1-201ENST00000616619 62 ntBASIC1.76□□□□□ -2.13
CENPAP49450 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CENPAP49450 Y_RNA.60-201ENST00000362831 98 ntBASIC1.75□□□□□ -2.13
CENPAP49450 Y_RNA.188-201ENST00000363952 111 ntBASIC1.75□□□□□ -2.13
CENPAP49450 Y_RNA.478-201ENST00000384358 107 ntBASIC1.75□□□□□ -2.13
CENPAP49450 RNU6-651P-201ENST00000411040 105 ntBASIC1.75□□□□□ -2.13
CENPAP49450 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.75□□□□□ -2.13
CENPAP49450 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.75□□□□□ -2.13
CENPAP49450 RNU6-1271P-201ENST00000517049 105 ntBASIC1.75□□□□□ -2.13
CENPAP49450 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.75□□□□□ -2.13
CENPAP49450 AC127455.1-201ENST00000565496 145 ntBASIC1.75□□□□□ -2.13
CENPAP49450 MIR5692C2-201ENST00000577959 77 ntBASIC1.75□□□□□ -2.13
CENPAP49450 MIR5089-201ENST00000580047 84 ntBASIC1.75□□□□□ -2.13
CENPAP49450 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.75□□□□□ -2.13
CENPAP49450 SNORA28-201ENST00000606769 126 ntBASIC1.75□□□□□ -2.13
CENPAP49450 AL008718.3-201ENST00000610217 321 ntBASIC1.75□□□□□ -2.13
CENPAP49450 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
CENPAP49450 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
CENPAP49450 Y_RNA.489-201ENST00000384410 101 ntBASIC1.74□□□□□ -2.13
CENPAP49450 RNU6-360P-201ENST00000390944 104 ntBASIC1.74□□□□□ -2.13
CENPAP49450 AL034345.1-201ENST00000407768 123 ntBASIC1.74□□□□□ -2.13
CENPAP49450 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.74□□□□□ -2.13
CENPAP49450 AL445646.1-201ENST00000431784 216 ntBASIC1.74□□□□□ -2.13
CENPAP49450 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.74□□□□□ -2.13
CENPAP49450 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
CENPAP49450 Y_RNA.680-201ENST00000516441 93 ntBASIC1.74□□□□□ -2.13
CENPAP49450 AL358944.1-201ENST00000528537 144 ntBASIC1.74□□□□□ -2.13
CENPAP49450 MIR4648-201ENST00000580107 72 ntBASIC1.74□□□□□ -2.13
CENPAP49450 AC005357.1-201ENST00000588399 301 ntBASIC1.74□□□□□ -2.13
CENPAP49450 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
CENPAP49450 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
CENPAP49450 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
CENPAP49450 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.73□□□□□ -2.13
CENPAP49450 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.73□□□□□ -2.13
CENPAP49450 MTND1P19-201ENST00000511780 315 ntBASIC1.73□□□□□ -2.13
CENPAP49450 AC107393.1-201ENST00000512403 346 ntBASIC1.73□□□□□ -2.13
CENPAP49450 RNU7-28P-201ENST00000516759 62 ntBASIC1.73□□□□□ -2.13
CENPAP49450 MIR4643-201ENST00000577473 78 ntBASIC1.73□□□□□ -2.13
CENPAP49450 AC006006.1-201ENST00000603082 144 ntBASIC1.73□□□□□ -2.13
CENPAP49450 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.73□□□□□ -2.13
CENPAP49450 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
CENPAP49450 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.20-201ENST00000362479 113 ntBASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.82-201ENST00000363000 102 ntBASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.92-201ENST00000363043 102 ntBASIC1.72□□□□□ -2.13
CENPAP49450 SNORD68-201ENST00000363214 84 ntBASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.122-201ENST00000363331 96 ntBASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.235-201ENST00000364412 102 ntBASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.306-201ENST00000365015 102 ntBASIC1.72□□□□□ -2.13
CENPAP49450 Y_RNA.312-201ENST00000365089 102 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms