Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNU2-48P-201ENST00000410694 191 ntBASIC1.47□□□□□ -2.17
ATRXP46100 AC005002.2-201ENST00000438228 269 ntBASIC1.47□□□□□ -2.17
ATRXP46100 SNORA27.4-201ENST00000516650 95 ntBASIC1.47□□□□□ -2.17
ATRXP46100 SCARNA3-201ENST00000517097 143 ntBASIC1.47□□□□□ -2.17
ATRXP46100 RNU6-586P-201ENST00000517265 104 ntBASIC1.47□□□□□ -2.17
ATRXP46100 MIR4506-201ENST00000584693 77 ntBASIC1.47□□□□□ -2.17
ATRXP46100 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATRXP46100 RNU6-674P-201ENST00000363831 107 ntBASIC1.47□□□□□ -2.17
ATRXP46100 RNU6-801P-201ENST00000364087 105 ntBASIC1.47□□□□□ -2.17
ATRXP46100 RNU1-96P-201ENST00000364163 162 ntBASIC1.47□□□□□ -2.17
ATRXP46100 Y_RNA.368-201ENST00000365547 113 ntBASIC1.47□□□□□ -2.17
ATRXP46100 RNU4-17P-201ENST00000365598 141 ntBASIC1.47□□□□□ -2.17
ATRXP46100 Y_RNA.785-201ENST00000384290 109 ntBASIC1.47□□□□□ -2.17
ATRXP46100 MIR218-1-201ENST00000384999 110 ntBASIC1.47□□□□□ -2.17
ATRXP46100 RNA5SP181-201ENST00000410246 98 ntBASIC1.47□□□□□ -2.17
ATRXP46100 PRELID3BP1-201ENST00000457142 540 ntBASIC1.47□□□□□ -2.17
ATRXP46100 Y_RNA.644-201ENST00000459006 113 ntBASIC1.47□□□□□ -2.17
ATRXP46100 U8.19-201ENST00000459095 133 ntBASIC1.47□□□□□ -2.17
ATRXP46100 SNORD65B-201ENST00000459126 73 ntBASIC1.47□□□□□ -2.17
ATRXP46100 Y_RNA.674-201ENST00000516362 113 ntBASIC1.47□□□□□ -2.17
ATRXP46100 RNA5SP54-201ENST00000516951 92 ntBASIC1.47□□□□□ -2.17
ATRXP46100 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.47□□□□□ -2.17
ATRXP46100 AC024405.2-202ENST00000532731 184 ntBASIC1.47□□□□□ -2.17
ATRXP46100 AC005972.2-201ENST00000604690 348 ntBASIC1.47□□□□□ -2.17
ATRXP46100 SNORD68-201ENST00000363214 84 ntBASIC1.46□□□□□ -2.18
ATRXP46100 Y_RNA.257-201ENST00000364596 102 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AC016925.1-201ENST00000458303 298 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AL049830.1-201ENST00000468034 425 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AC010409.1-201ENST00000487382 476 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-138P-201ENST00000515952 107 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-948P-201ENST00000516374 107 ntBASIC1.46□□□□□ -2.18
ATRXP46100 MIR3186-201ENST00000577404 85 ntBASIC1.46□□□□□ -2.18
ATRXP46100 snoU18.1-201ENST00000629629 71 ntBASIC1.46□□□□□ -2.18
ATRXP46100 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
ATRXP46100 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
ATRXP46100 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ATRXP46100 SNORD114-19-201ENST00000363072 75 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-653P-201ENST00000363074 106 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-487P-201ENST00000365430 104 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-546P-201ENST00000383991 107 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-926P-201ENST00000384075 107 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU11-3P-201ENST00000391111 133 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.46□□□□□ -2.18
ATRXP46100 AC024067.1-201ENST00000426199 223 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RPS20P10-201ENST00000451209 253 ntBASIC1.46□□□□□ -2.18
ATRXP46100 SNORD116-28-201ENST00000516123 91 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU2-12P-201ENST00000517216 168 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AC005176.2-201ENST00000596933 147 ntBASIC1.46□□□□□ -2.18
ATRXP46100 Y_RNA.772-201ENST00000606692 102 ntBASIC1.46□□□□□ -2.18
ATRXP46100 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.46□□□□□ -2.18
ATRXP46100 AC069294.1-201ENST00000608397 350 ntBASIC1.46□□□□□ -2.18
ATRXP46100 FO624990.1-201ENST00000636373 85 ntBASIC1.46□□□□□ -2.18
ATRXP46100 RNU6-280P-201ENST00000364145 104 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNU6-461P-201ENST00000364195 107 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNA5SP467-201ENST00000391274 118 ntBASIC1.45□□□□□ -2.18
ATRXP46100 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.45□□□□□ -2.18
ATRXP46100 RNU6-437P-201ENST00000459408 95 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RPL26P26-201ENST00000480251 434 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNU11-2P-201ENST00000516898 142 ntBASIC1.45□□□□□ -2.18
ATRXP46100 UBE2WP1-201ENST00000362030 340 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNA5SP493-201ENST00000364115 91 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNU6-1130P-201ENST00000365434 107 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNU6-886P-201ENST00000384319 105 ntBASIC1.45□□□□□ -2.18
ATRXP46100 MIR1185-2-201ENST00000408687 86 ntBASIC1.45□□□□□ -2.18
ATRXP46100 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.45□□□□□ -2.18
ATRXP46100 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.45□□□□□ -2.18
ATRXP46100 RNU6-408P-201ENST00000515910 100 ntBASIC1.45□□□□□ -2.18
ATRXP46100 MIR4724-201ENST00000579485 89 ntBASIC1.45□□□□□ -2.18
ATRXP46100 AP003357.1-201ENST00000604497 148 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RPL17P51-201ENST00000605218 238 ntBASIC1.45□□□□□ -2.18
ATRXP46100 AL449363.1-201ENST00000617815 186 ntBASIC1.45□□□□□ -2.18
ATRXP46100 MIR5739-201ENST00000619803 80 ntBASIC1.45□□□□□ -2.18
ATRXP46100 RNU6-103P-201ENST00000363686 107 ntBASIC1.44□□□□□ -2.18
ATRXP46100 Y_RNA.287-201ENST00000364853 94 ntBASIC1.44□□□□□ -2.18
ATRXP46100 Y_RNA.571-201ENST00000384753 98 ntBASIC1.44□□□□□ -2.18
ATRXP46100 AC016909.1-201ENST00000415916 166 ntBASIC1.44□□□□□ -2.18
ATRXP46100 AC117454.1-201ENST00000491120 168 ntBASIC1.44□□□□□ -2.18
ATRXP46100 AC090255.1-201ENST00000495779 349 ntBASIC1.44□□□□□ -2.18
ATRXP46100 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.44□□□□□ -2.18
ATRXP46100 HMGB3P3-201ENST00000510526 400 ntBASIC1.44□□□□□ -2.18
ATRXP46100 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
ATRXP46100 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ATRXP46100 SNORA25.1-201ENST00000362326 128 ntBASIC1.44□□□□□ -2.18
ATRXP46100 Y_RNA.332-201ENST00000365271 113 ntBASIC1.44□□□□□ -2.18
ATRXP46100 Y_RNA.412-201ENST00000384001 104 ntBASIC1.44□□□□□ -2.18
ATRXP46100 SNORA72.4-201ENST00000384174 132 ntBASIC1.44□□□□□ -2.18
ATRXP46100 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
ATRXP46100 RNU6-1228P-201ENST00000391014 107 ntBASIC1.44□□□□□ -2.18
ATRXP46100 SNORA26.7-201ENST00000391288 122 ntBASIC1.44□□□□□ -2.18
ATRXP46100 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ATRXP46100 AC060773.1-201ENST00000421698 310 ntBASIC1.44□□□□□ -2.18
ATRXP46100 AC010531.2-201ENST00000465012 153 ntBASIC1.44□□□□□ -2.18
ATRXP46100 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.44□□□□□ -2.18
ATRXP46100 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.44□□□□□ -2.18
ATRXP46100 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.44□□□□□ -2.18
ATRXP46100 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.44□□□□□ -2.18
ATRXP46100 MIR3618-201ENST00000580330 88 ntBASIC1.44□□□□□ -2.18
ATRXP46100 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.44□□□□□ -2.18
ATRXP46100 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms