Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR4762-201ENST00000585261 75 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 AC013791.1-201ENST00000616619 62 ntBASIC1.5□□□□□ -2.17
NKX2-1P43699 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NKX2-1P43699 Y_RNA.122-201ENST00000363331 96 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 U8.7-201ENST00000364940 136 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 RNU6-969P-201ENST00000383900 105 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 RNU6-440P-201ENST00000390882 105 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 SNORA26.5-201ENST00000391215 123 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 RNA5SP482-201ENST00000391269 118 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 RPL30P13-201ENST00000418873 348 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 AL606517.2-201ENST00000442855 241 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 TRBV12-1-201ENST00000479785 344 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 SNORA31.10-201ENST00000516482 106 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 RNU6-63P-201ENST00000516690 95 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 POLR3GP1-201ENST00000594073 261 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 SNORA28-201ENST00000606769 126 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 MIR548AY-201ENST00000617669 107 ntBASIC1.49□□□□□ -2.17
NKX2-1P43699 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.49□□□□□ -2.17
NKX2-1P43699 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
NKX2-1P43699 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NKX2-1P43699 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 MIR194-1-201ENST00000384892 85 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNU6-763P-201ENST00000390865 106 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNA5SP109-201ENST00000391010 116 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNU2-38P-201ENST00000410856 79 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX2-1P43699 AC245047.3-201ENST00000429428 127 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNU7-141P-201ENST00000459304 62 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.48□□□□□ -2.17
NKX2-1P43699 AC011604.1-201ENST00000545978 196 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 AC091544.4-201ENST00000555268 342 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 MIR5692C2-201ENST00000577959 77 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 snoU18.1-201ENST00000629629 71 ntBASIC1.48□□□□□ -2.17
NKX2-1P43699 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NKX2-1P43699 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NKX2-1P43699 MIR424-201ENST00000362227 98 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 RNU6-1123P-201ENST00000362347 106 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 U8.5-201ENST00000364528 136 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 RNU6-740P-201ENST00000364734 105 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 RNU6-1289P-201ENST00000384431 106 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 RNU6-1031P-201ENST00000384773 107 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 MIR526A2-201ENST00000390198 65 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AL603910.2-201ENST00000407268 136 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 RNU2-14P-201ENST00000411053 191 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AL445685.2-201ENST00000422551 342 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NKX2-1P43699 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.47□□□□□ -2.17
NKX2-1P43699 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.47□□□□□ -2.17
NKX2-1P43699 RPL23AP94-201ENST00000512518 302 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 SCARNA24.2-201ENST00000516968 130 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AC024405.2-202ENST00000532731 184 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 CBX3P4-201ENST00000538909 354 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.47□□□□□ -2.17
NKX2-1P43699 MIR2681-201ENST00000581814 105 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 MIR4422-201ENST00000581938 83 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AP000942.4-201ENST00000604811 241 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AC011921.3-201ENST00000605540 361 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AC073349.3-201ENST00000617616 186 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AC068647.2-201ENST00000637380 353 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 AL442644.1-201ENST00000454390 3105 ntBASIC1.47□□□□□ -2.17
NKX2-1P43699 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.47□□□□□ -2.17
NKX2-1P43699 U8.2-201ENST00000363156 134 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 RNU4-13P-201ENST00000364019 141 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 SNORD48-201ENST00000364953 64 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 SNORA4.2-201ENST00000365313 147 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 Y_RNA.447-201ENST00000384184 113 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 AL034345.1-201ENST00000407768 123 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 SNORA36B-201ENST00000410438 131 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 PGBD4P5-201ENST00000445958 426 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 AL049830.1-201ENST00000468034 425 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 OR9P1P-201ENST00000496431 281 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 AC107393.1-201ENST00000512403 346 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX2-1P43699 MIR4643-201ENST00000577473 78 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 MIR4648-201ENST00000580107 72 ntBASIC1.46□□□□□ -2.18
NKX2-1P43699 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.46□□□□□ -2.18
NKX2-1P43699 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
NKX2-1P43699 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
NKX2-1P43699 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.45□□□□□ -2.18
NKX2-1P43699 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 Y_RNA.304-201ENST00000365011 112 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 RNU6-211P-201ENST00000384047 107 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 RNU6-574P-201ENST00000384265 107 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 Y_RNA.539-201ENST00000384635 107 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 SNORA12.1-201ENST00000390873 148 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 RNA5SP496-201ENST00000391240 109 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AC019129.1-201ENST00000403786 261 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AC004965.1-201ENST00000413033 213 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.45□□□□□ -2.18
NKX2-1P43699 Z98949.2-201ENST00000440996 144 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AC245517.4-201ENST00000448601 281 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AC087685.1-201ENST00000587507 141 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AL008718.3-201ENST00000610217 321 ntBASIC1.45□□□□□ -2.18
NKX2-1P43699 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.45□□□□□ -2.18
NKX2-1P43699 AL513423.1-201ENST00000621695 132 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms