Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR329-2-201ENST00000385029 84 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 RNU6-1001P-201ENST00000411265 100 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
BRCA1P38398 AC026782.1-201ENST00000512952 449 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 RNU6-1337P-201ENST00000516525 95 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 MTND2P38-201ENST00000522536 667 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 AP003716.2-201ENST00000528260 108 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 Y_RNA.89-201ENST00000363031 102 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 Y_RNA.124-201ENST00000363339 93 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 Y_RNA.339-201ENST00000365325 102 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 RNU6-396P-201ENST00000365369 105 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 AL139396.1-201ENST00000421137 167 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 RNU7-87P-201ENST00000459343 62 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 RNU4-54P-201ENST00000516428 129 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 AC120024.3-201ENST00000603167 156 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 Y_RNA.361-201ENST00000365515 120 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 SNORA2B-201ENST00000384583 137 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 RNU6-136P-201ENST00000384663 107 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 AL137792.2-201ENST00000443484 235 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 AC114811.1-201ENST00000507207 168 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 SNORA18.7-201ENST00000516910 131 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 MTND4LP26-201ENST00000518144 282 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 AF235103.2-201ENST00000525753 346 ntBASIC0.44□□□□□ -2.34
BRCA1P38398 Y_RNA.364-201ENST00000365532 101 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 Y_RNA.370-201ENST00000365589 108 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 RNU6-318P-201ENST00000384283 103 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 SNORA75.4-201ENST00000391278 119 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 MLLT10P1-201ENST00000418346 262 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 AC091179.3-201ENST00000474761 144 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 RNU6-1116P-201ENST00000517269 99 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 AL353765.1-201ENST00000605514 183 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 AC106800.4-201ENST00000614905 153 ntBASIC0.43□□□□□ -2.34
BRCA1P38398 Y_RNA.48-201ENST00000362710 103 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RNU4-24P-201ENST00000364565 139 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RNU6-125P-201ENST00000384505 107 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RNU2-54P-201ENST00000410299 190 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 SNORD12B-201ENST00000410433 91 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RPL23AP50-201ENST00000434149 455 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 UQCRBP2-201ENST00000447827 297 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.42□□□□□ -2.34
BRCA1P38398 SNORA40.9-201ENST00000515895 93 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RNA5SP285-201ENST00000516619 119 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RNU6-1314P-201ENST00000517139 104 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 MIR5589-201ENST00000579442 60 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 AC127459.3-201ENST00000624328 466 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 AC023934.1-201ENST00000574529 2389 ntBASIC0.42□□□□□ -2.34
BRCA1P38398 RNU6-601P-201ENST00000384540 107 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 MIR516B2-201ENST00000385190 85 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU6-159P-201ENST00000391080 106 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNA5SP25-201ENST00000410815 110 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 HMGN1P10-201ENST00000474557 553 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU6-436P-201ENST00000516171 114 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU6-63P-201ENST00000516690 95 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU7-30P-201ENST00000516835 62 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU6-1096P-201ENST00000517089 102 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.41□□□□□ -2.34
BRCA1P38398 MIR548AR-201ENST00000582191 57 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 MIR4636-201ENST00000582271 80 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AL096861.1-201ENST00000610899 123 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AL591926.4-201ENST00000616895 298 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
BRCA1P38398 MIR452-201ENST00000385020 85 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 SNORD105-201ENST00000386910 85 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU6-131P-201ENST00000391144 107 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RNU6-1148P-201ENST00000410992 104 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AL353997.1-201ENST00000432936 108 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 RPS3AP52-201ENST00000435639 297 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.41□□□□□ -2.34
BRCA1P38398 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.41□□□□□ -2.34
BRCA1P38398 FCF1P4-201ENST00000448326 183 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 SNORA74.3-201ENST00000517108 154 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.41□□□□□ -2.34
BRCA1P38398 AC242498.1-201ENST00000604134 111 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 AC243994.1-201ENST00000618627 109 ntBASIC0.41□□□□□ -2.34
BRCA1P38398 Y_RNA.106-201ENST00000363189 100 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 Y_RNA.390-201ENST00000383932 102 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 RNU6-1050P-201ENST00000410388 107 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 RPS26P5-201ENST00000418544 335 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 snoU13.21-201ENST00000459368 105 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.4□□□□□ -2.35
BRCA1P38398 AC004467.1-201ENST00000615678 330 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 MIR3674-201ENST00000636576 68 ntBASIC0.4□□□□□ -2.35
BRCA1P38398 RNU6-1059P-201ENST00000363752 98 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RNU4-75P-201ENST00000364621 146 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RNU6-442P-201ENST00000383968 104 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RNY3P4-201ENST00000384428 101 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 RPS3AP1-201ENST00000413190 320 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 AC009161.1-201ENST00000417306 376 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.39□□□□□ -2.35
BRCA1P38398 MTND3P10-201ENST00000450967 341 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 MIR2053-201ENST00000459295 91 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.39□□□□□ -2.35
BRCA1P38398 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.39□□□□□ -2.35
BRCA1P38398 PISRT1.1-201ENST00000616930 107 ntBASIC0.39□□□□□ -2.35
BRCA1P38398 U4.5-201ENST00000617137 123 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms