Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 Y_RNA.172-201ENST00000363765 102 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 AL390729.2-201ENST00000416137 156 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 Y_RNA.635-201ENST00000459041 101 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 RNU7-169P-201ENST00000459456 61 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 SNORA25.10-201ENST00000515926 124 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 SNORA18.7-201ENST00000516910 131 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 SNORA74.3-201ENST00000517108 154 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.64□□□□□ -2.31
FDFT1P37268 AC005176.2-201ENST00000596933 147 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 AC240442.1-201ENST00000616055 283 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 AC098679.4-201ENST00000624241 654 ntBASIC0.64□□□□□ -2.31
FDFT1P37268 Y_RNA.253-201ENST00000364562 112 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 SNORD14.1-201ENST00000365609 90 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 RNU6-1297P-201ENST00000384415 104 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 Y_RNA.605-201ENST00000410577 105 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 RNU6-370P-201ENST00000411008 104 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.63□□□□□ -2.31
FDFT1P37268 RNU7-41P-201ENST00000515917 61 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 RNU6-155P-201ENST00000516347 100 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 AC144568.1-201ENST00000520139 137 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 AC022616.4-201ENST00000522985 181 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 RMST_2.1-201ENST00000617263 136 ntBASIC0.63□□□□□ -2.31
FDFT1P37268 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
FDFT1P37268 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
FDFT1P37268 RNU6-845P-201ENST00000362578 103 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 RNU6-626P-201ENST00000363354 107 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 RNY3P11-201ENST00000364153 102 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 RNU6-20P-201ENST00000384106 107 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 MIR522-201ENST00000385071 87 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 SNORA75.6-201ENST00000391318 127 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 Y_RNA.646-201ENST00000410980 101 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 RNU2-61P-201ENST00000411069 191 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 MTND1P4-201ENST00000435196 415 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 CHEK2P4-201ENST00000450340 246 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 RPL30P15-201ENST00000457129 321 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 PRDX4P1-201ENST00000507189 574 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 RNU7-4P-201ENST00000516961 62 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 SEPT14P17-201ENST00000617978 177 ntBASIC0.62□□□□□ -2.31
FDFT1P37268 Y_RNA.160-201ENST00000363677 92 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 snoU2-30.1-201ENST00000365012 70 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC117470.1-201ENST00000381974 330 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 Y_RNA.446-201ENST00000384178 104 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 RNY3P4-201ENST00000384428 101 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 RNU6-310P-201ENST00000384655 107 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 MIR15B-201ENST00000385045 98 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 SNORD78.2-201ENST00000391076 69 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 RNU6-1304P-201ENST00000411374 106 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC109810.1-201ENST00000534066 224 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC133485.1-201ENST00000567176 124 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 MIR4764-201ENST00000580680 88 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 MIR5690-201ENST00000583739 73 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC005972.2-201ENST00000604690 348 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 AC011476.5-201ENST00000615594 130 ntBASIC0.61□□□□□ -2.31
FDFT1P37268 RNU6-1188P-201ENST00000363795 107 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 RNU6-890P-201ENST00000384121 107 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 RNU6-131P-201ENST00000391144 107 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 MIR1185-1-201ENST00000408598 86 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 RNU6-1199P-201ENST00000411249 104 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 Y_RNA.691-201ENST00000516611 103 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 AP003716.2-201ENST00000528260 108 ntBASIC0.6□□□□□ -2.31
FDFT1P37268 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.6□□□□□ -2.31
FDFT1P37268 RNU6-1335P-201ENST00000365426 107 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 MIR628-201ENST00000385229 95 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 SNRPGP10-201ENST00000432323 225 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 HMGN2P32-201ENST00000444648 269 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 SNORD123-201ENST00000459473 70 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 AC113410.1-201ENST00000505029 247 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 RNU6-436P-201ENST00000516171 114 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 RNU7-43P-201ENST00000516554 64 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 RNU6-1012P-201ENST00000516606 109 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 Y_RNA.714-201ENST00000517065 90 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 MIR4659A-201ENST00000580269 81 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 7SK.10-201ENST00000621414 298 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 TPTEP1-208ENST00000636884 213 ntBASIC0.59□□□□□ -2.31
FDFT1P37268 RNA5SP48-201ENST00000363969 126 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 Y_RNA.279-201ENST00000364763 95 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 SNORD50B-201ENST00000364995 70 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 Y_RNA.314-201ENST00000365114 102 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 SNORA72-201ENST00000384339 132 ntBASIC0.58□□□□□ -2.32
FDFT1P37268 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms