Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-1096P-201ENST00000517089 102 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 AL356055.1-201ENST00000602528 446 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 AC073349.3-201ENST00000617616 186 ntBASIC1.21□□□□□ -2.22
HMGCLP35914 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGCLP35914 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
HMGCLP35914 ICE2P2-201ENST00000483823 2787 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 Y_RNA.286-201ENST00000364813 102 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 MIR660-201ENST00000385235 97 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 RNU6-985P-201ENST00000410182 104 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 ELOCP20-201ENST00000422460 345 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGCLP35914 Z98949.2-201ENST00000440996 144 ntBASIC1.2□□□□□ -2.22
HMGCLP35914 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.2□□□□□ -2.22
HMGCLP35914 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMGCLP35914 AC245060.5-201ENST00000610778 3293 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 RNU6-450P-201ENST00000364654 107 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 Y_RNA.326-201ENST00000365176 113 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 Y_RNA.418-201ENST00000384029 102 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 MIR653-201ENST00000385279 96 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGCLP35914 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 RNU7-34P-201ENST00000459394 64 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 RNU6-1153P-201ENST00000516760 105 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 DEFB117-201ENST00000602356 141 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 AC005972.2-201ENST00000604690 348 ntBASIC1.19□□□□□ -2.22
HMGCLP35914 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.19□□□□□ -2.22
HMGCLP35914 snoU2_19.2-201ENST00000363024 80 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 Y_RNA.389-201ENST00000383924 113 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 SNORA72-201ENST00000384339 132 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 RNU6-102P-201ENST00000384485 104 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 RNU4-30P-201ENST00000410245 143 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGCLP35914 LINC01399-202ENST00000458450 244 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 RNU6-1291P-201ENST00000516591 104 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 RNU7-110P-201ENST00000516891 62 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 AP003357.1-201ENST00000604497 148 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 MIR376A1-201ENST00000616574 68 ntBASIC1.18□□□□□ -2.22
HMGCLP35914 RNU6-770P-201ENST00000363929 105 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 RNU4-41P-201ENST00000364426 143 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 Y_RNA.383-201ENST00000383855 97 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 RNU6-969P-201ENST00000383900 105 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 U8.16-201ENST00000391279 133 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 CALM2P4-201ENST00000430810 426 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGCLP35914 STAG3L5P-204ENST00000443759 179 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 U8.19-201ENST00000459095 133 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 RPL39P38-201ENST00000467018 153 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 RNA5SP168-201ENST00000516642 112 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGCLP35914 AC136628.3-201ENST00000521868 290 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 AC027279.3-201ENST00000625055 122 ntBASIC1.17□□□□□ -2.22
HMGCLP35914 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGCLP35914 SNORD113-8-201ENST00000363497 74 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU6-324P-201ENST00000363957 106 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU6-801P-201ENST00000364087 105 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 Y_RNA.518-201ENST00000384552 113 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 Y_RNA.527-201ENST00000384573 102 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGCLP35914 AC104332.1-201ENST00000440471 797 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 AC079140.2-201ENST00000506193 142 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU6-1143P-201ENST00000516125 104 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU6-191P-201ENST00000516295 94 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU6-764P-201ENST00000516396 105 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU2-56P-201ENST00000516826 190 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU7-116P-201ENST00000516940 62 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 AC131281.1-201ENST00000522984 164 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 AC011604.1-201ENST00000545978 196 ntBASIC1.16□□□□□ -2.22
HMGCLP35914 RNU4-90P-201ENST00000362773 141 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 RNU6-833P-201ENST00000363486 107 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 Y_RNA.267-201ENST00000364679 109 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 Y_RNA.327-201ENST00000365201 102 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 Y_RNA.341-201ENST00000365341 102 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 Y_RNA.422-201ENST00000384054 114 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 RNU6-639P-201ENST00000384074 107 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 RNU6-21P-201ENST00000384710 107 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 AL590004.1-201ENST00000405321 300 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 RNU6-397P-201ENST00000516226 104 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 RNU7-115P-201ENST00000516433 55 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGCLP35914 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 AL121890.5-201ENST00000620848 304 ntBASIC1.15□□□□□ -2.23
HMGCLP35914 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMGCLP35914 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMGCLP35914 Y_RNA.26-201ENST00000362539 101 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 RNU6-674P-201ENST00000363831 107 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 Y_RNA.253-201ENST00000364562 112 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 Y_RNA.265-201ENST00000364677 108 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms