Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC093908.1-201ENST00000623125 8092 ntBASIC3.76□□□□□ -1.81
CLCN1P35523 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCN1P35523 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLCN1P35523 Y_RNA.351-201ENST00000365436 96 ntBASIC3.76□□□□□ -1.81
CLCN1P35523 Y_RNA.544-201ENST00000384650 113 ntBASIC3.76□□□□□ -1.81
CLCN1P35523 AC104332.2-201ENST00000429959 156 ntBASIC3.76□□□□□ -1.81
CLCN1P35523 AP003355.3-201ENST00000623465 114 ntBASIC3.76□□□□□ -1.81
CLCN1P35523 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLCN1P35523 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.76□□□□□ -1.81
CLCN1P35523 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLCN1P35523 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLCN1P35523 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.76□□□□□ -1.81
CLCN1P35523 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLCN1P35523 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CLCN1P35523 U8.6-201ENST00000364939 135 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 RNU6-1131P-201ENST00000364955 107 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.75□□□□□ -1.81
CLCN1P35523 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.75□□□□□ -1.81
CLCN1P35523 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.75□□□□□ -1.81
CLCN1P35523 AL606517.2-201ENST00000442855 241 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 AC115115.1-201ENST00000449927 248 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 RNU7-80P-201ENST00000459562 61 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 RNU6-970P-201ENST00000516312 107 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 RNU7-28P-201ENST00000516759 62 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 SNORA31.26-201ENST00000517250 137 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 U4atac.1-201ENST00000618345 95 ntBASIC3.75□□□□□ -1.81
CLCN1P35523 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CLCN1P35523 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLCN1P35523 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CLCN1P35523 RNU6-294P-201ENST00000364999 102 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 RNA5SP109-201ENST00000391010 116 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 SNORA11.4-201ENST00000408823 129 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 RNU6-938P-201ENST00000411285 103 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 AC087499.4-201ENST00000448505 178 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 SNORA70.24-201ENST00000517233 118 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 AC068339.1-201ENST00000526965 141 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CLCN1P35523 MIR4778-201ENST00000577635 80 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 MIR5009-201ENST00000578736 100 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 AC012442.3-202ENST00000636742 206 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN1P35523 AL596211.1-201ENST00000569873 2277 ntBASIC3.74□□□□□ -1.81
CLCN1P35523 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN1P35523 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN1P35523 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLCN1P35523 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN1P35523 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN1P35523 SNORD115-3-201ENST00000363100 82 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 SNORA5A-201ENST00000384111 134 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 MIR491-201ENST00000384877 84 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 MT-TI-201ENST00000387365 69 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN1P35523 CYCSP4-201ENST00000429682 331 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN1P35523 SNORD105B-201ENST00000458770 79 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 RNU7-123P-201ENST00000515911 60 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 RN7SKP18-201ENST00000516005 275 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 MIR3169-201ENST00000578032 83 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCN1P35523 AC009093.8-201ENST00000641769 292 ntBASIC3.73□□□□□ -1.81
CLCN1P35523 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN1P35523 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCN1P35523 SNORD73B-201ENST00000364394 72 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 Y_RNA.454-201ENST00000384224 113 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 RNU6-440P-201ENST00000390882 105 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 STAG3L5P-204ENST00000443759 179 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 RN7SKP43-201ENST00000516173 320 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 MIR4305-201ENST00000583252 102 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 AC007179.3-201ENST00000604976 235 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.72□□□□□ -1.81
CLCN1P35523 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCN1P35523 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLCN1P35523 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.81
CLCN1P35523 SNORD38C-201ENST00000384381 69 ntBASIC3.71□□□□□ -1.82
CLCN1P35523 SNX2P2-201ENST00000424553 323 ntBASIC3.71□□□□□ -1.82
CLCN1P35523 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCN1P35523 AL445687.1-201ENST00000439946 251 ntBASIC3.71□□□□□ -1.82
CLCN1P35523 AP004217.1-201ENST00000480579 346 ntBASIC3.71□□□□□ -1.82
CLCN1P35523 SNORA74D-201ENST00000516404 141 ntBASIC3.71□□□□□ -1.82
CLCN1P35523 AC091932.4-201ENST00000623386 200 ntBASIC3.71□□□□□ -1.82
CLCN1P35523 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLCN1P35523 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCN1P35523 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCN1P35523 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLCN1P35523 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCN1P35523 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCN1P35523 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CLCN1P35523 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCN1P35523 MIR342-201ENST00000362212 99 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 RNA5SP119-201ENST00000362715 117 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 SNORA9-201ENST00000384215 133 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 RNU6-163P-201ENST00000384396 106 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 AC114811.1-201ENST00000507207 168 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 AC022523.2-201ENST00000561045 150 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 AC026271.5-201ENST00000577873 130 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 MIR3163-201ENST00000581592 73 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 AC002984.1-201ENST00000591692 448 ntBASIC3.7□□□□□ -1.82
CLCN1P35523 AL449363.1-201ENST00000617815 186 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms