Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-117P-201ENST00000365415 107 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 RNU6-708P-201ENST00000384217 107 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 MIR9-2-201ENST00000384838 87 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 MT-TF-201ENST00000387314 71 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 AC006210.1-201ENST00000424882 111 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.35□□□□□ -2.63
CLIP1P30622 AL137792.2-201ENST00000443484 235 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 HMGN2P32-201ENST00000444648 269 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.35□□□□□ -2.63
CLIP1P30622 BNIP3P40-201ENST00000596017 556 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 AC026741.1-201ENST00000605892 482 ntBASIC-1.35□□□□□ -2.63
CLIP1P30622 RNU6-462P-201ENST00000362659 105 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 RNU6-403P-201ENST00000363163 104 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 RNU6-926P-201ENST00000384075 107 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 SNORD38B-201ENST00000384690 67 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.36□□□□□ -2.63
CLIP1P30622 AL512286.1-201ENST00000439244 400 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 AC010655.3-201ENST00000478818 450 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.36□□□□□ -2.63
CLIP1P30622 POLR3GP1-201ENST00000594073 261 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 AC127459.3-201ENST00000624328 466 ntBASIC-1.36□□□□□ -2.63
CLIP1P30622 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
CLIP1P30622 SNORA27.1-201ENST00000362604 124 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.37□□□□□ -2.63
CLIP1P30622 AL158053.1-201ENST00000441503 453 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 MTCO2P6-201ENST00000463134 685 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 RNU2-13P-201ENST00000515909 113 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 RNU7-188P-201ENST00000517063 64 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 AC022784.5-201ENST00000522241 437 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 AC140658.3-201ENST00000567603 271 ntBASIC-1.37□□□□□ -2.63
CLIP1P30622 MTND5P18-201ENST00000445624 1801 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 MIR450B-201ENST00000401182 78 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 AC010587.1-201ENST00000505809 469 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.38□□□□□ -2.63
CLIP1P30622 MIR3118-1-201ENST00000581787 76 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 AC245297.2-201ENST00000610119 565 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 MIR6851-201ENST00000617060 67 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 AL445984.1-201ENST00000637834 659 ntBASIC-1.38□□□□□ -2.63
CLIP1P30622 RNA5SP245-201ENST00000364239 121 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 RNU6-715P-201ENST00000365204 103 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 RNU6-901P-201ENST00000384593 106 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 AC236972.2-201ENST00000434979 310 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.39□□□□□ -2.63
CLIP1P30622 AC011352.1-201ENST00000512300 793 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 AC091144.1-201ENST00000519573 138 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 AC011458.1-201ENST00000604034 617 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 MIR8084-201ENST00000614105 89 ntBASIC-1.39□□□□□ -2.63
CLIP1P30622 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU4-16P-201ENST00000364737 141 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-245P-201ENST00000384020 107 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-207P-201ENST00000384137 107 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 SNORD38C-201ENST00000384381 69 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-847P-201ENST00000411115 108 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU2-11P-201ENST00000459191 187 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RN7SKP19-201ENST00000516016 252 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MTND3P13-201ENST00000574391 343 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MIR3179-1-201ENST00000578940 84 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MIR3179-2-201ENST00000579107 84 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MIR3179-3-201ENST00000579566 84 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 AC018462.2-201ENST00000605375 395 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MIR3179-4-201ENST00000617599 84 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-641P-201ENST00000384006 107 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-224P-201ENST00000384055 107 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MIR517B-201ENST00000385102 67 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 AC244505.6-201ENST00000452829 130 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 MTND1P12-201ENST00000455231 147 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 SNORA25.14-201ENST00000516481 132 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 RNU6-765P-201ENST00000516916 99 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.4□□□□□ -2.63
CLIP1P30622 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 SNORD115-44-201ENST00000365391 82 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 AL354751.2-201ENST00000415471 210 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 MTATP6P14-201ENST00000455189 673 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 SCARNA18B-201ENST00000458806 135 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 RNU6-830P-201ENST00000516353 107 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 RNU6-612P-201ENST00000516909 102 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 SNORA25.17-201ENST00000517184 124 ntBASIC-1.41□□□□□ -2.64
CLIP1P30622 RNU6-502P-201ENST00000362419 108 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 RNU6-354P-201ENST00000383862 107 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 RNU6-610P-201ENST00000384264 107 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 MTCYBP36-201ENST00000404146 440 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 AL590002.1-201ENST00000406554 418 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 SNORA13-201ENST00000458790 133 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 HSPE1P23-201ENST00000509838 286 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 RNA5SP216-201ENST00000516111 123 ntBASIC-1.42□□□□□ -2.64
CLIP1P30622 AC131281.1-201ENST00000522984 164 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms