Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.17□□□□□ -2.44
CD40LGP29965 RNU6-625P-201ENST00000459412 107 ntBASIC-0.17□□□□□ -2.44
CD40LGP29965 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.17□□□□□ -2.44
CD40LGP29965 AC116353.2-201ENST00000505332 712 ntBASIC-0.17□□□□□ -2.44
CD40LGP29965 AC093424.1-201ENST00000604999 338 ntBASIC-0.17□□□□□ -2.44
CD40LGP29965 MIR6755-201ENST00000619993 66 ntBASIC-0.17□□□□□ -2.44
CD40LGP29965 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.17□□□□□ -2.44
CD40LGP29965 MTND1P7-201ENST00000632801 297 ntBASIC-0.17□□□□□ -2.44
CD40LGP29965 RNY1P16-201ENST00000363063 111 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 RNA5SP457-201ENST00000363657 124 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 SNORA51.10-201ENST00000384418 136 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 RNU6-125P-201ENST00000384505 107 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 RNA5SP496-201ENST00000391240 109 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 MIR938-201ENST00000401216 83 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.18□□□□□ -2.44
CD40LGP29965 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.18□□□□□ -2.44
CD40LGP29965 HMGN1P10-201ENST00000474557 553 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.18□□□□□ -2.44
CD40LGP29965 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.18□□□□□ -2.44
CD40LGP29965 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.18□□□□□ -2.44
CD40LGP29965 AC090897.1-201ENST00000580909 226 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 AC008608.1-201ENST00000603910 127 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.18□□□□□ -2.44
CD40LGP29965 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
CD40LGP29965 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 PCNPP3-201ENST00000393579 471 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.19□□□□□ -2.44
CD40LGP29965 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.19□□□□□ -2.44
CD40LGP29965 MIR3678-201ENST00000578455 94 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 MIR3672-201ENST00000584290 82 ntBASIC-0.19□□□□□ -2.44
CD40LGP29965 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 SNORA36.1-201ENST00000363424 132 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 RNU6-879P-201ENST00000364328 108 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 RNU6-596P-201ENST00000365395 98 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 SNORD38C-201ENST00000384381 69 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 MIR145-201ENST00000384967 88 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 U8.17-201ENST00000391292 132 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 RNU2-59P-201ENST00000410482 191 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 BTF3P11-201ENST00000426582 477 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 RN7SKP298-201ENST00000515950 94 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 RNU6-256P-201ENST00000516747 97 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 AC022616.4-201ENST00000522985 181 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.2□□□□□ -2.44
CD40LGP29965 MIR4264-201ENST00000583520 66 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 Z69908.1-201ENST00000622603 247 ntBASIC-0.2□□□□□ -2.44
CD40LGP29965 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.2□□□□□ -2.44
CD40LGP29965 SNORA9.1-201ENST00000362412 131 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 SNORD14E-201ENST00000364009 85 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 SNORD115-30-201ENST00000364117 82 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.21□□□□□ -2.44
CD40LGP29965 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.21□□□□□ -2.44
CD40LGP29965 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.21□□□□□ -2.44
CD40LGP29965 RNU7-66P-201ENST00000459469 62 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 SNORA40.9-201ENST00000515895 93 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 MIR4791-201ENST00000607666 84 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 Pinc.1-201ENST00000616452 154 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 uc_338.4-201ENST00000616635 176 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 MIR6779-201ENST00000617283 64 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 AL109933.3-201ENST00000619095 188 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 AC098679.4-201ENST00000624241 654 ntBASIC-0.21□□□□□ -2.44
CD40LGP29965 RNU6V-201ENST00000384105 107 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 RNU6-127P-201ENST00000390897 107 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
CD40LGP29965 MIR190B-201ENST00000401119 79 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.22□□□□□ -2.44
CD40LGP29965 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.22□□□□□ -2.44
CD40LGP29965 RNU7-102P-201ENST00000458948 62 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 RPL23AP54-201ENST00000495129 419 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 RNU4-49P-201ENST00000516080 140 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 RNU6-830P-201ENST00000516353 107 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 AL158211.1-201ENST00000566763 763 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 AC010525.2-201ENST00000590920 195 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 AC005972.2-201ENST00000604690 348 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 AC073114.1-201ENST00000612027 490 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 AC240442.1-201ENST00000616055 283 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 AC023510.2-201ENST00000622162 746 ntBASIC-0.22□□□□□ -2.44
CD40LGP29965 MIR593-201ENST00000384856 100 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 MIR610-201ENST00000385139 96 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 MIR644A-201ENST00000385262 94 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 RNU6-700P-201ENST00000391043 107 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 AC090844.1-201ENST00000422019 156 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 U8.22-201ENST00000459141 133 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 RNU7-87P-201ENST00000459343 62 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.23□□□□□ -2.45
CD40LGP29965 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.23□□□□□ -2.45
CD40LGP29965 RNA5SP268-201ENST00000516828 124 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms