Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 Y_RNA.368-201ENST00000365547 113 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 SNORD42.2-201ENST00000365570 69 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 SNORA63.7-201ENST00000365579 123 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 Y_RNA.471-201ENST00000384312 102 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 SNORD41-201ENST00000386967 70 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 RNU6-855P-201ENST00000410395 104 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 AC093850.1-201ENST00000454121 251 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 TRMT112P2-201ENST00000512910 132 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 RNU7-110P-201ENST00000516891 62 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 Y_RNA.714-201ENST00000517065 90 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 AC040926.1-201ENST00000530195 238 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 AL591926.4-201ENST00000616895 298 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
PSMB4P28070 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
PSMB4P28070 Y_RNA.172-201ENST00000363765 102 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 Y_RNA.341-201ENST00000365341 102 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 MIR452-201ENST00000385020 85 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 RNU6-321P-201ENST00000410912 106 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 RPL39P39-201ENST00000455840 151 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 SNORA25.10-201ENST00000515926 124 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 AL160236.1-201ENST00000556317 195 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 AC090971.5-201ENST00000621102 293 ntBASIC1.17□□□□□ -2.22
PSMB4P28070 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PSMB4P28070 AL391987.6-201ENST00000305671 199 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 Y_RNA.80-201ENST00000362996 102 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 Y_RNA.310-201ENST00000365063 113 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 Y_RNA.424-201ENST00000384063 103 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 Y_RNA.485-201ENST00000384395 102 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 RNU6-21P-201ENST00000384710 107 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 RNU6-1248P-201ENST00000391096 64 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 DYNLT3P2-201ENST00000442517 295 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.16□□□□□ -2.22
PSMB4P28070 SNORA31.4-201ENST00000516049 129 ntBASIC1.16□□□□□ -2.22
PSMB4P28070 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
PSMB4P28070 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.15□□□□□ -2.22
PSMB4P28070 SNORD81.1-201ENST00000363064 77 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 Y_RNA.509-201ENST00000384506 99 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 MIR522-201ENST00000385071 87 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 MTND1P14-201ENST00000427400 950 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 MTND4P19-201ENST00000446659 478 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 HMGN1P10-201ENST00000474557 553 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 HMGN1P7-201ENST00000491722 313 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 SEPT14P8-201ENST00000508026 178 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 SNORD113-5-201ENST00000607261 78 ntBASIC1.15□□□□□ -2.23
PSMB4P28070 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PSMB4P28070 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.15□□□□□ -2.23
PSMB4P28070 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
PSMB4P28070 LINC01399-202ENST00000458450 244 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 AC005840.1-201ENST00000498412 377 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 AC114811.1-201ENST00000507207 168 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 SNORD116-28-201ENST00000516123 91 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 RNU6-1116P-201ENST00000517269 99 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 C8orf59P2-201ENST00000603441 271 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 AC007485.1-201ENST00000616755 206 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
PSMB4P28070 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.14□□□□□ -2.23
PSMB4P28070 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
PSMB4P28070 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PSMB4P28070 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PSMB4P28070 Y_RNA.143-201ENST00000363520 106 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 Y_RNA.226-201ENST00000364337 114 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 SNORA25.9-201ENST00000365087 128 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 AC117470.1-201ENST00000381974 330 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 Y_RNA.460-201ENST00000384255 102 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 RNU6-937P-201ENST00000384325 106 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.13□□□□□ -2.23
PSMB4P28070 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.13□□□□□ -2.23
PSMB4P28070 AC104332.1-201ENST00000440471 797 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 HMGN2P32-201ENST00000444648 269 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 SNORA70.22-201ENST00000517160 124 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 Y_RNA.721-201ENST00000517207 102 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 AC008269.2-201ENST00000561915 1105 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 FAM106DP-201ENST00000586416 501 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 POLR3GP1-201ENST00000594073 261 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 DEFB117-201ENST00000602356 141 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 AP003357.1-201ENST00000604497 148 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
PSMB4P28070 Y_RNA.336-201ENST00000365307 109 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 PIGPP3-201ENST00000425307 415 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 AC245047.7-201ENST00000440265 293 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 Y_RNA.673-201ENST00000516306 88 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 AC087685.1-201ENST00000587507 141 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 BX284668.6-201ENST00000606899 438 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 AL160413.1-201ENST00000622780 310 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 AC090574.1-201ENST00000623186 233 ntBASIC1.12□□□□□ -2.23
PSMB4P28070 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms