Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 MIR338-201ENST00000636369 67 ntBASIC4.08□□□□□ -1.76
PTPREP23469 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPREP23469 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPREP23469 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPREP23469 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPREP23469 Y_RNA.241-201ENST00000364470 117 ntBASIC4.07□□□□□ -1.76
PTPREP23469 RNU6-1083P-201ENST00000384022 107 ntBASIC4.07□□□□□ -1.76
PTPREP23469 RNA5SP309-201ENST00000516670 106 ntBASIC4.07□□□□□ -1.76
PTPREP23469 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPREP23469 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPREP23469 AC145423.2-201ENST00000610631 239 ntBASIC4.07□□□□□ -1.76
PTPREP23469 U4.6-201ENST00000621618 127 ntBASIC4.07□□□□□ -1.76
PTPREP23469 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPREP23469 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPREP23469 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PTPREP23469 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPREP23469 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPREP23469 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPREP23469 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PTPREP23469 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPREP23469 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPREP23469 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.06□□□□□ -1.76
PTPREP23469 AC069257.2-201ENST00000441819 155 ntBASIC4.06□□□□□ -1.76
PTPREP23469 MIR1270-201ENST00000459320 83 ntBASIC4.06□□□□□ -1.76
PTPREP23469 RNU7-96P-201ENST00000459535 64 ntBASIC4.06□□□□□ -1.76
PTPREP23469 AC108729.3-201ENST00000513484 108 ntBASIC4.06□□□□□ -1.76
PTPREP23469 SCARNA17.1-201ENST00000516211 143 ntBASIC4.06□□□□□ -1.76
PTPREP23469 SCARNA17.2-201ENST00000516334 143 ntBASIC4.06□□□□□ -1.76
PTPREP23469 MIR548AE2-201ENST00000583456 67 ntBASIC4.06□□□□□ -1.76
PTPREP23469 ZNF861P-201ENST00000588126 639 ntBASIC4.06□□□□□ -1.76
PTPREP23469 SCARNA17.4-201ENST00000614296 143 ntBASIC4.06□□□□□ -1.76
PTPREP23469 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPREP23469 RNA5SP323-201ENST00000391094 133 ntBASIC4.05□□□□□ -1.76
PTPREP23469 AP000567.1-201ENST00000406413 156 ntBASIC4.05□□□□□ -1.76
PTPREP23469 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPREP23469 AC026333.2-201ENST00000542164 106 ntBASIC4.05□□□□□ -1.76
PTPREP23469 RNU6-86P-201ENST00000606534 107 ntBASIC4.05□□□□□ -1.76
PTPREP23469 MIR7112-201ENST00000616126 65 ntBASIC4.05□□□□□ -1.76
PTPREP23469 AC022149.2-201ENST00000621061 203 ntBASIC4.05□□□□□ -1.76
PTPREP23469 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPREP23469 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
PTPREP23469 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPREP23469 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPREP23469 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPREP23469 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPREP23469 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPREP23469 RNU1-105P-201ENST00000363470 161 ntBASIC4.04□□□□□ -1.76
PTPREP23469 SNORD115-27-201ENST00000364430 82 ntBASIC4.04□□□□□ -1.76
PTPREP23469 AL138878.1-201ENST00000405131 347 ntBASIC4.04□□□□□ -1.76
PTPREP23469 AC090844.1-201ENST00000422019 156 ntBASIC4.04□□□□□ -1.76
PTPREP23469 RNU7-45P-201ENST00000459460 63 ntBASIC4.04□□□□□ -1.76
PTPREP23469 RNU7-94P-201ENST00000459576 63 ntBASIC4.04□□□□□ -1.76
PTPREP23469 RN7SL594P-201ENST00000470590 287 ntBASIC4.04□□□□□ -1.76
PTPREP23469 AP003355.3-201ENST00000623465 114 ntBASIC4.04□□□□□ -1.76
PTPREP23469 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPREP23469 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPREP23469 SNORD115-2-201ENST00000362842 82 ntBASIC4.03□□□□□ -1.76
PTPREP23469 Y_RNA.247-201ENST00000364500 92 ntBASIC4.03□□□□□ -1.76
PTPREP23469 SNORD115-20-201ENST00000365099 82 ntBASIC4.03□□□□□ -1.76
PTPREP23469 Y_RNA.470-201ENST00000384307 117 ntBASIC4.03□□□□□ -1.76
PTPREP23469 Y_RNA.494-201ENST00000384432 111 ntBASIC4.03□□□□□ -1.76
PTPREP23469 SNORA8-201ENST00000384574 139 ntBASIC4.03□□□□□ -1.76
PTPREP23469 RNA5SP33-201ENST00000516687 98 ntBASIC4.03□□□□□ -1.76
PTPREP23469 IGKV2-26-201ENST00000518305 343 ntBASIC4.03□□□□□ -1.76
PTPREP23469 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPREP23469 U4atac.1-201ENST00000618345 95 ntBASIC4.03□□□□□ -1.76
PTPREP23469 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
PTPREP23469 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPREP23469 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPREP23469 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPREP23469 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPREP23469 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPREP23469 RNU6-457P-201ENST00000363999 107 ntBASIC4.02□□□□□ -1.77
PTPREP23469 RNU6-524P-201ENST00000384270 107 ntBASIC4.02□□□□□ -1.77
PTPREP23469 Z98941.1-201ENST00000407764 100 ntBASIC4.02□□□□□ -1.77
PTPREP23469 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPREP23469 RPS12P2-201ENST00000439728 269 ntBASIC4.02□□□□□ -1.77
PTPREP23469 AL161788.1-201ENST00000441805 169 ntBASIC4.02□□□□□ -1.77
PTPREP23469 AL135938.1-201ENST00000443141 297 ntBASIC4.02□□□□□ -1.77
PTPREP23469 AL031183.1-201ENST00000457667 207 ntBASIC4.02□□□□□ -1.77
PTPREP23469 AL049873.1-201ENST00000480540 376 ntBASIC4.02□□□□□ -1.77
PTPREP23469 AC090821.2-201ENST00000523552 176 ntBASIC4.02□□□□□ -1.77
PTPREP23469 CTSLP2-204ENST00000629029 392 ntBASIC4.02□□□□□ -1.77
PTPREP23469 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.02□□□□□ -1.77
PTPREP23469 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPREP23469 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPREP23469 AC091564.4-201ENST00000533934 2194 ntBASIC4.02□□□□□ -1.77
PTPREP23469 AC002546.1-201ENST00000588041 2504 ntBASIC4.01□□□□□ -1.77
PTPREP23469 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPREP23469 MIR3074-201ENST00000384885 81 ntBASIC4.01□□□□□ -1.77
PTPREP23469 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPREP23469 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPREP23469 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPREP23469 MIR4425-201ENST00000580572 84 ntBASIC4.01□□□□□ -1.77
PTPREP23469 RNVU1-4-201ENST00000612985 164 ntBASIC4.01□□□□□ -1.77
PTPREP23469 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PTPREP23469 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PTPREP23469 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4□□□□□ -1.77
PTPREP23469 AC005336.3-201ENST00000623833 2679 ntBASIC4□□□□□ -1.77
PTPREP23469 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms