Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SNORA18.7-201ENST00000516910 131 ntBASIC0.44□□□□□ -2.34
USF1P22415 RNU2-12P-201ENST00000517216 168 ntBASIC0.44□□□□□ -2.34
USF1P22415 AP003484.1-201ENST00000530974 250 ntBASIC0.44□□□□□ -2.34
USF1P22415 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.44□□□□□ -2.34
USF1P22415 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
USF1P22415 RNU6-1084P-201ENST00000362498 107 ntBASIC0.43□□□□□ -2.34
USF1P22415 RNA5SP457-201ENST00000363657 124 ntBASIC0.43□□□□□ -2.34
USF1P22415 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
USF1P22415 MIR522-201ENST00000385071 87 ntBASIC0.43□□□□□ -2.34
USF1P22415 U8.19-201ENST00000459095 133 ntBASIC0.43□□□□□ -2.34
USF1P22415 RNU6-329P-201ENST00000459618 107 ntBASIC0.43□□□□□ -2.34
USF1P22415 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
USF1P22415 RNU6-408P-201ENST00000515910 100 ntBASIC0.43□□□□□ -2.34
USF1P22415 SNORD45.4-201ENST00000516629 73 ntBASIC0.43□□□□□ -2.34
USF1P22415 Y_RNA.708-201ENST00000516950 96 ntBASIC0.43□□□□□ -2.34
USF1P22415 AC036111.3-201ENST00000526389 112 ntBASIC0.43□□□□□ -2.34
USF1P22415 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.43□□□□□ -2.34
USF1P22415 AC005899.2-201ENST00000584353 90 ntBASIC0.43□□□□□ -2.34
USF1P22415 AC006380.1-201ENST00000603598 186 ntBASIC0.43□□□□□ -2.34
USF1P22415 AC009229.3-201ENST00000608056 282 ntBASIC0.43□□□□□ -2.34
USF1P22415 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
USF1P22415 AC004467.1-201ENST00000615678 330 ntBASIC0.43□□□□□ -2.34
USF1P22415 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
USF1P22415 RNU6-510P-201ENST00000391239 108 ntBASIC0.42□□□□□ -2.34
USF1P22415 MIR548K-201ENST00000408406 116 ntBASIC0.42□□□□□ -2.34
USF1P22415 RNU6-994P-201ENST00000410507 111 ntBASIC0.42□□□□□ -2.34
USF1P22415 MRPS18CP6-201ENST00000423587 223 ntBASIC0.42□□□□□ -2.34
USF1P22415 AL157398.1-201ENST00000452981 186 ntBASIC0.42□□□□□ -2.34
USF1P22415 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.42□□□□□ -2.34
USF1P22415 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
USF1P22415 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.42□□□□□ -2.34
USF1P22415 Y_RNA.115-201ENST00000363272 98 ntBASIC0.41□□□□□ -2.34
USF1P22415 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
USF1P22415 Y_RNA.253-201ENST00000364562 112 ntBASIC0.41□□□□□ -2.34
USF1P22415 MLLT10P1-201ENST00000418346 262 ntBASIC0.41□□□□□ -2.34
USF1P22415 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.41□□□□□ -2.34
USF1P22415 RPS3AP52-201ENST00000435639 297 ntBASIC0.41□□□□□ -2.34
USF1P22415 HMGN2P32-201ENST00000444648 269 ntBASIC0.41□□□□□ -2.34
USF1P22415 Z83846.1-201ENST00000446798 265 ntBASIC0.41□□□□□ -2.34
USF1P22415 RNU6-307P-201ENST00000516743 106 ntBASIC0.41□□□□□ -2.34
USF1P22415 AF235103.2-201ENST00000525753 346 ntBASIC0.41□□□□□ -2.34
USF1P22415 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
USF1P22415 MIR8087-201ENST00000612745 78 ntBASIC0.41□□□□□ -2.34
USF1P22415 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
USF1P22415 AC092794.2-201ENST00000620933 563 ntBASIC0.41□□□□□ -2.34
USF1P22415 SNORD113.3-201ENST00000364630 78 ntBASIC0.4□□□□□ -2.35
USF1P22415 snoU2-30.1-201ENST00000365012 70 ntBASIC0.4□□□□□ -2.35
USF1P22415 RNU6-945P-201ENST00000383947 107 ntBASIC0.4□□□□□ -2.35
USF1P22415 RNU6-601P-201ENST00000384540 107 ntBASIC0.4□□□□□ -2.35
USF1P22415 AL031003.1-201ENST00000404229 172 ntBASIC0.4□□□□□ -2.35
USF1P22415 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.4□□□□□ -2.35
USF1P22415 AL390729.2-201ENST00000416137 156 ntBASIC0.4□□□□□ -2.35
USF1P22415 AC244098.3-201ENST00000424803 96 ntBASIC0.4□□□□□ -2.35
USF1P22415 MTND1P4-201ENST00000435196 415 ntBASIC0.4□□□□□ -2.35
USF1P22415 AL392103.1-201ENST00000447000 198 ntBASIC0.4□□□□□ -2.35
USF1P22415 SNORD123-201ENST00000459473 70 ntBASIC0.4□□□□□ -2.35
USF1P22415 RPL17P19-201ENST00000489069 552 ntBASIC0.4□□□□□ -2.35
USF1P22415 SNORA25.10-201ENST00000515926 124 ntBASIC0.4□□□□□ -2.35
USF1P22415 Y_RNA.714-201ENST00000517065 90 ntBASIC0.4□□□□□ -2.35
USF1P22415 RNA5SP330-201ENST00000517096 96 ntBASIC0.4□□□□□ -2.35
USF1P22415 AC011195.1-201ENST00000578177 177 ntBASIC0.4□□□□□ -2.35
USF1P22415 AC018638.8-201ENST00000588755 281 ntBASIC0.4□□□□□ -2.35
USF1P22415 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.4□□□□□ -2.35
USF1P22415 U4.5-201ENST00000617137 123 ntBASIC0.4□□□□□ -2.35
USF1P22415 MIR330-201ENST00000362196 94 ntBASIC0.39□□□□□ -2.35
USF1P22415 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
USF1P22415 Y_RNA.453-201ENST00000384223 109 ntBASIC0.39□□□□□ -2.35
USF1P22415 Y_RNA.482-201ENST00000384377 111 ntBASIC0.39□□□□□ -2.35
USF1P22415 RNU6-131P-201ENST00000391144 107 ntBASIC0.39□□□□□ -2.35
USF1P22415 MIR548F5-201ENST00000408421 86 ntBASIC0.39□□□□□ -2.35
USF1P22415 AL358176.2-201ENST00000425769 204 ntBASIC0.39□□□□□ -2.35
USF1P22415 RPL7P42-201ENST00000481005 679 ntBASIC0.39□□□□□ -2.35
USF1P22415 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.39□□□□□ -2.35
USF1P22415 AC093027.1-201ENST00000546698 429 ntBASIC0.39□□□□□ -2.35
USF1P22415 AC091925.1-201ENST00000623204 462 ntBASIC0.39□□□□□ -2.35
USF1P22415 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.39□□□□□ -2.35
USF1P22415 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
USF1P22415 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
USF1P22415 SNORD105-201ENST00000386910 85 ntBASIC0.38□□□□□ -2.35
USF1P22415 MIR1827-201ENST00000408549 66 ntBASIC0.38□□□□□ -2.35
USF1P22415 RNU2-61P-201ENST00000411069 191 ntBASIC0.38□□□□□ -2.35
USF1P22415 RNU6-1304P-201ENST00000411374 106 ntBASIC0.38□□□□□ -2.35
USF1P22415 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.38□□□□□ -2.35
USF1P22415 AC107399.1-201ENST00000451226 265 ntBASIC0.38□□□□□ -2.35
USF1P22415 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.38□□□□□ -2.35
USF1P22415 MIR2053-201ENST00000459295 91 ntBASIC0.38□□□□□ -2.35
USF1P22415 EIF1P4-201ENST00000572664 335 ntBASIC0.38□□□□□ -2.35
USF1P22415 AC005972.2-201ENST00000604690 348 ntBASIC0.38□□□□□ -2.35
USF1P22415 MIR1244-1-201ENST00000612829 85 ntBASIC0.38□□□□□ -2.35
USF1P22415 PISRT1.1-201ENST00000616930 107 ntBASIC0.38□□□□□ -2.35
USF1P22415 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.38□□□□□ -2.35
USF1P22415 MIR1244-3-201ENST00000635744 85 ntBASIC0.38□□□□□ -2.35
USF1P22415 MIR1244-2-201ENST00000636449 85 ntBASIC0.38□□□□□ -2.35
USF1P22415 MIR1244-4-202ENST00000636813 85 ntBASIC0.38□□□□□ -2.35
USF1P22415 MIR3688-2-201ENST00000636963 87 ntBASIC0.38□□□□□ -2.35
USF1P22415 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
USF1P22415 RNU6-961P-201ENST00000363893 105 ntBASIC0.37□□□□□ -2.35
USF1P22415 SNORD50B-201ENST00000364995 70 ntBASIC0.37□□□□□ -2.35
USF1P22415 Y_RNA.374-201ENST00000365606 101 ntBASIC0.37□□□□□ -2.35
USF1P22415 RNU6-716P-201ENST00000365621 103 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms