Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.94□□□□□ -2.26
COL5A1P20908 MIR3126-201ENST00000577443 74 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 MIR4713-201ENST00000582691 75 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC005176.2-201ENST00000596933 147 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC004467.1-201ENST00000615678 330 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL5A1P20908 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.14-201ENST00000362415 103 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.101-201ENST00000363154 102 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNA5SP493-201ENST00000364115 91 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU6-1305P-201ENST00000364353 104 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.380-201ENST00000365663 111 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.483-201ENST00000384380 101 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU6-1026P-201ENST00000384465 108 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU11-3P-201ENST00000391111 133 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNA5SP504-201ENST00000410676 117 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 FTH1P12-201ENST00000432137 551 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.94□□□□□ -2.26
COL5A1P20908 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RPL23AP6-201ENST00000446637 472 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 UQCRBP2-201ENST00000447827 297 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC010655.3-201ENST00000478818 450 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 SEPT14P8-201ENST00000508026 178 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 SNORA70.12-201ENST00000516084 153 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU6-1278P-201ENST00000516130 107 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNA5SP121-201ENST00000516537 101 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.720-201ENST00000517166 92 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.94□□□□□ -2.26
COL5A1P20908 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.94□□□□□ -2.26
COL5A1P20908 AL162730.1-201ENST00000605734 292 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 MIR924-201ENST00000638017 53 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNA5SP276-201ENST00000362580 94 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 Y_RNA.85-201ENST00000363014 111 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 SNORD113-8-201ENST00000363497 74 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 RNU6-418P-201ENST00000384035 107 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 SNORD26-201ENST00000384147 75 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 RNU6-417P-201ENST00000384712 107 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 MIR1302-3-201ENST00000408128 138 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 MIR1283-2-201ENST00000408621 87 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 Y_RNA.602-201ENST00000410535 92 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 MRPS10P1-201ENST00000448483 130 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 AC016717.1-201ENST00000448918 286 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.93□□□□□ -2.26
COL5A1P20908 RNU7-94P-201ENST00000459576 63 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 SCARNA24.2-201ENST00000516968 130 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 DEFB108E-201ENST00000524692 240 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.93□□□□□ -2.26
COL5A1P20908 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 MIR4300-201ENST00000581016 96 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 MIR3149-201ENST00000584629 83 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 AL353149.1-201ENST00000610667 244 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 AC006435.5-201ENST00000624486 112 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 U6.115-201ENST00000636045 103 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 MIR3674-201ENST00000636576 68 ntBASIC0.93□□□□□ -2.26
COL5A1P20908 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
COL5A1P20908 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL5A1P20908 AL159152.1-201ENST00000635019 2587 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 UBE2WP1-201ENST00000362030 340 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.19-201ENST00000362462 99 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.105-201ENST00000363182 111 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.183-201ENST00000363882 113 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 SNORD115-30-201ENST00000364117 82 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-743P-201ENST00000364151 106 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.276-201ENST00000364732 109 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 MIR548B-201ENST00000385247 97 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
COL5A1P20908 AL355796.1-201ENST00000406706 323 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-710P-201ENST00000410424 105 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-57P-201ENST00000411348 103 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AL158823.1-201ENST00000418441 478 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 JTBP1-201ENST00000441314 247 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC018868.1-201ENST00000491307 315 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC011406.1-201ENST00000512440 370 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-948P-201ENST00000516374 107 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC022254.1-201ENST00000567857 235 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC005357.1-201ENST00000588399 301 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 PRR13P7-201ENST00000605538 430 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC062037.2-201ENST00000610137 73 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.92□□□□□ -2.26
COL5A1P20908 U3.8-201ENST00000363675 217 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.329-201ENST00000365209 107 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-407P-201ENST00000365280 104 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.456-201ENST00000384232 111 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-937P-201ENST00000384325 106 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-21P-201ENST00000384710 107 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 Y_RNA.574-201ENST00000384766 95 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 MIR936-201ENST00000401264 98 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU2-7P-201ENST00000410794 178 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.92□□□□□ -2.26
COL5A1P20908 AC123900.1-201ENST00000420390 96 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.92□□□□□ -2.26
COL5A1P20908 MTCO1P5-201ENST00000433573 344 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 MTCO1P44-201ENST00000441935 243 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.92□□□□□ -2.26
COL5A1P20908 SNORD127-201ENST00000458892 86 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 AC098869.1-201ENST00000481627 292 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU6-496P-201ENST00000516145 99 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU2-34P-201ENST00000516534 121 ntBASIC0.92□□□□□ -2.26
COL5A1P20908 RNU7-110P-201ENST00000516891 62 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms