Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
XRCC1P18887 UBL5P1-201ENST00000507979 193 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 Y_RNA.714-201ENST00000517065 90 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 RNU6-1116P-201ENST00000517269 99 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 AC005730.3-201ENST00000583067 366 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 RBM11P1-201ENST00000604951 799 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 AL132765.2-201ENST00000610812 351 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 AL591926.4-201ENST00000616895 298 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 U6.92-201ENST00000636464 89 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 SNORA72.1-201ENST00000363485 129 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 Y_RNA.336-201ENST00000365307 109 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 Y_RNA.462-201ENST00000384268 102 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 Y_RNA.463-201ENST00000384271 102 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 SNORA72-201ENST00000384339 132 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 SNORD116-13-201ENST00000384408 92 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.89□□□□□ -2.27
XRCC1P18887 MCFD2P1-201ENST00000417812 300 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.89□□□□□ -2.27
XRCC1P18887 RNU7-152P-201ENST00000458982 64 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 AC114811.1-201ENST00000507207 168 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 AC006600.1-201ENST00000572529 153 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.89□□□□□ -2.27
XRCC1P18887 AC084781.2-201ENST00000615568 161 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 AC011476.5-201ENST00000615594 130 ntBASIC0.89□□□□□ -2.27
XRCC1P18887 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
XRCC1P18887 Y_RNA.146-201ENST00000363549 102 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 MIR15B-201ENST00000385045 98 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 AC024067.1-201ENST00000426199 223 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 AC002429.1-201ENST00000437672 148 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.88□□□□□ -2.27
XRCC1P18887 RPEP5-201ENST00000441137 268 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 AC093019.1-201ENST00000443135 252 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
XRCC1P18887 AC005042.3-201ENST00000453230 174 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.88□□□□□ -2.27
XRCC1P18887 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 Y_RNA.772-201ENST00000606692 102 ntBASIC0.88□□□□□ -2.27
XRCC1P18887 RNU6-1175P-201ENST00000365200 107 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 Y_RNA.570-201ENST00000384750 101 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 MIR522-201ENST00000385071 87 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 PIGPP3-201ENST00000425307 415 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 AC236972.2-201ENST00000434979 310 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.87□□□□□ -2.27
XRCC1P18887 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.87□□□□□ -2.27
XRCC1P18887 RPS20P10-201ENST00000451209 253 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 SNORD111.1-201ENST00000516421 86 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 MIR4423-201ENST00000580922 80 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 SNORA4-201ENST00000584302 138 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 PRELID3BP2-201ENST00000605362 201 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 AC091925.1-201ENST00000623204 462 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 MIR4272-201ENST00000635924 64 ntBASIC0.87□□□□□ -2.27
XRCC1P18887 Y_RNA.253-201ENST00000364562 112 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 RNU1-115P-201ENST00000365329 160 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 AC117470.1-201ENST00000381974 330 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 RNU6-1323P-201ENST00000384025 107 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 RNU6-708P-201ENST00000384217 107 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 MIR136-201ENST00000385207 82 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 MIR1298-201ENST00000408783 112 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 AC096644.2-201ENST00000429278 159 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
XRCC1P18887 HMGN2P32-201ENST00000444648 269 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 AC245047.8-201ENST00000456455 284 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 Y_RNA.632-201ENST00000459189 102 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 RNU7-116P-201ENST00000516940 62 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 Y_RNA.713-201ENST00000517013 96 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 AL355375.2-201ENST00000574825 175 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 RPS29P30-201ENST00000600975 111 ntBASIC0.86□□□□□ -2.27
XRCC1P18887 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.86□□□□□ -2.27
XRCC1P18887 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
XRCC1P18887 RNU6-1084P-201ENST00000362498 107 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 Y_RNA.39-201ENST00000362620 98 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 Y_RNA.252-201ENST00000364556 101 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 snoU2-30.1-201ENST00000365012 70 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 Y_RNA.329-201ENST00000365209 107 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 Y_RNA.363-201ENST00000365529 113 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 Y_RNA.526-201ENST00000384572 110 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 RNU6-1009P-201ENST00000390996 107 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 SNORD19B-201ENST00000459623 84 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 AC091951.2-201ENST00000500762 203 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 SNORA25.10-201ENST00000515926 124 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 SNORA40.14-201ENST00000516543 86 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 AL121655.1-201ENST00000605811 308 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 AL096861.1-201ENST00000610899 123 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 AL391903.3-201ENST00000612158 163 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 AC007742.2-201ENST00000618226 398 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 AL008636.1-201ENST00000625038 1018 ntBASIC0.85□□□□□ -2.27
XRCC1P18887 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
XRCC1P18887 Y_RNA.172-201ENST00000363765 102 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 Y_RNA.263-201ENST00000364659 114 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 Y_RNA.456-201ENST00000384232 111 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 RNU6-855P-201ENST00000410395 104 ntBASIC0.84□□□□□ -2.27
XRCC1P18887 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.84□□□□□ -2.27
XRCC1P18887 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms