Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNU6-937P-201ENST00000384325 106 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 RNU6-163P-201ENST00000384396 106 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 MIR891A-201ENST00000401237 79 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 AL390729.2-201ENST00000416137 156 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 PIGPP3-201ENST00000425307 415 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 SNORA25.10-201ENST00000515926 124 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 RNU6-947P-201ENST00000516264 106 ntBASIC1.24□□□□□ -2.21
ERCC2P18074 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.24□□□□□ -2.21
ERCC2P18074 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
ERCC2P18074 RNU6-833P-201ENST00000363486 107 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 RNU4-50P-201ENST00000364361 141 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 RNU6-1105P-201ENST00000384774 107 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 RNU4-30P-201ENST00000410245 143 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 RNU6-855P-201ENST00000410395 104 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 RNU6-130P-201ENST00000411112 103 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC2P18074 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC2P18074 RPS20P10-201ENST00000451209 253 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 CYCTP-201ENST00000504253 315 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 AC005972.2-201ENST00000604690 348 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 PART1_1.1-201ENST00000611761 217 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 AL160413.1-201ENST00000622780 310 ntBASIC1.23□□□□□ -2.21
ERCC2P18074 SNORD81.1-201ENST00000363064 77 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 Y_RNA.424-201ENST00000384063 103 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 SNORD63-201ENST00000384262 68 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 Y_RNA.551-201ENST00000384661 102 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 MIR526A1-201ENST00000384897 85 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 PMCHL1-202ENST00000423102 261 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 AC114811.1-201ENST00000507207 168 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 Y_RNA.713-201ENST00000517013 96 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 AC022616.4-201ENST00000522985 181 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 DEFB117-201ENST00000602356 141 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 AC090574.1-201ENST00000623186 233 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
ERCC2P18074 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ERCC2P18074 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
ERCC2P18074 MTND4P29-201ENST00000503122 1372 ntBASIC1.21□□□□□ -2.21
ERCC2P18074 Y_RNA.61-201ENST00000362835 102 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 Y_RNA.394-201ENST00000383942 103 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 Y_RNA.460-201ENST00000384255 102 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 RNU6-21P-201ENST00000384710 107 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 RNU6-710P-201ENST00000410424 105 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 AL357312.1-201ENST00000603879 298 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.21□□□□□ -2.22
ERCC2P18074 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
ERCC2P18074 Y_RNA.148-201ENST00000363557 117 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 U8.5-201ENST00000364528 136 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 Y_RNA.253-201ENST00000364562 112 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 RNU6-474P-201ENST00000384243 107 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 Y_RNA.535-201ENST00000384612 99 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 AL590004.1-201ENST00000405321 300 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 AC010655.3-201ENST00000478818 450 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 TRMT112P2-201ENST00000512910 132 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 MIR3145-201ENST00000580727 82 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 MIR4762-201ENST00000585261 75 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 AC124312.5-201ENST00000604451 268 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
ERCC2P18074 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 Y_RNA.341-201ENST00000365341 102 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 SNORA72-201ENST00000384339 132 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ERCC2P18074 Y_RNA.645-201ENST00000391229 102 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 Y_RNA.604-201ENST00000410574 102 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 MLLT10P1-201ENST00000418346 262 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.19□□□□□ -2.22
ERCC2P18074 AC245047.7-201ENST00000440265 293 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
ERCC2P18074 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 RNU6-397P-201ENST00000516226 104 ntBASIC1.19□□□□□ -2.22
ERCC2P18074 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.19□□□□□ -2.22
ERCC2P18074 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.19□□□□□ -2.22
ERCC2P18074 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
ERCC2P18074 MIR337-201ENST00000362281 93 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 Y_RNA.28-201ENST00000362554 111 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 RNU6-450P-201ENST00000364654 107 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 Y_RNA.310-201ENST00000365063 113 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 MIR522-201ENST00000385071 87 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
ERCC2P18074 RPL39P39-201ENST00000455840 151 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 Y_RNA.631-201ENST00000459607 101 ntBASIC1.18□□□□□ -2.22
ERCC2P18074 AC005840.1-201ENST00000498412 377 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms