Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 RNU7-99P-201ENST00000516271 62 ntBASIC2.58□□□□□ -2
ZNF28P17035 RNU6-1291P-201ENST00000516591 104 ntBASIC2.58□□□□□ -2
ZNF28P17035 RNU6-667P-201ENST00000517186 102 ntBASIC2.58□□□□□ -2
ZNF28P17035 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.58□□□□□ -2
ZNF28P17035 AC007751.1-201ENST00000529260 376 ntBASIC2.58□□□□□ -2
ZNF28P17035 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
ZNF28P17035 AL365205.2-201ENST00000594586 68 ntBASIC2.58□□□□□ -2
ZNF28P17035 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF28P17035 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.58□□□□□ -2
ZNF28P17035 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF28P17035 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF28P17035 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.57□□□□□ -2
ZNF28P17035 RNA5SP68-201ENST00000363885 119 ntBASIC2.57□□□□□ -2
ZNF28P17035 RNU6-647P-201ENST00000364243 107 ntBASIC2.57□□□□□ -2
ZNF28P17035 SNORD58C-201ENST00000365223 64 ntBASIC2.57□□□□□ -2
ZNF28P17035 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
ZNF28P17035 MIR561-201ENST00000385216 97 ntBASIC2.57□□□□□ -2
ZNF28P17035 Y_RNA.630-201ENST00000411370 108 ntBASIC2.57□□□□□ -2
ZNF28P17035 SNRPGP10-201ENST00000432323 225 ntBASIC2.57□□□□□ -2
ZNF28P17035 MRPS17P9-201ENST00000511924 393 ntBASIC2.57□□□□□ -2
ZNF28P17035 RNU6-1041P-201ENST00000516254 102 ntBASIC2.57□□□□□ -2
ZNF28P17035 RNU6-589P-201ENST00000516485 107 ntBASIC2.57□□□□□ -2
ZNF28P17035 RNU7-128P-201ENST00000517247 62 ntBASIC2.57□□□□□ -2
ZNF28P17035 AC091178.2-201ENST00000584401 117 ntBASIC2.57□□□□□ -2
ZNF28P17035 AC108081.1-201ENST00000604358 221 ntBASIC2.57□□□□□ -2
ZNF28P17035 AL670379.3-201ENST00000605040 251 ntBASIC2.57□□□□□ -2
ZNF28P17035 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
ZNF28P17035 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
ZNF28P17035 RNU6-508P-201ENST00000363231 103 ntBASIC2.56□□□□□ -2
ZNF28P17035 Y_RNA.253-201ENST00000364562 112 ntBASIC2.56□□□□□ -2
ZNF28P17035 RNU6-309P-201ENST00000364573 106 ntBASIC2.56□□□□□ -2
ZNF28P17035 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
ZNF28P17035 SNORA12.1-201ENST00000390873 148 ntBASIC2.56□□□□□ -2
ZNF28P17035 RNU6-220P-201ENST00000390919 107 ntBASIC2.56□□□□□ -2
ZNF28P17035 SNORA26.7-201ENST00000391288 122 ntBASIC2.56□□□□□ -2
ZNF28P17035 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
ZNF28P17035 RNU6-504P-201ENST00000516568 104 ntBASIC2.56□□□□□ -2
ZNF28P17035 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.56□□□□□ -2
ZNF28P17035 MIR3945-201ENST00000581853 98 ntBASIC2.56□□□□□ -2
ZNF28P17035 AL359075.3-201ENST00000613288 217 ntBASIC2.56□□□□□ -2
ZNF28P17035 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
ZNF28P17035 MIR6733-201ENST00000635723 61 ntBASIC2.56□□□□□ -2
ZNF28P17035 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ZNF28P17035 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF28P17035 Y_RNA.267-201ENST00000364679 109 ntBASIC2.55□□□□□ -2
ZNF28P17035 SNORA22-201ENST00000383907 134 ntBASIC2.55□□□□□ -2
ZNF28P17035 RNA5SP467-201ENST00000391274 118 ntBASIC2.55□□□□□ -2
ZNF28P17035 MIR891A-201ENST00000401237 79 ntBASIC2.55□□□□□ -2
ZNF28P17035 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
ZNF28P17035 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.55□□□□□ -2
ZNF28P17035 AL353689.1-201ENST00000438895 199 ntBASIC2.55□□□□□ -2
ZNF28P17035 MTATP6P21-201ENST00000440681 189 ntBASIC2.55□□□□□ -2
ZNF28P17035 RPS26P45-201ENST00000471748 340 ntBASIC2.55□□□□□ -2
ZNF28P17035 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
ZNF28P17035 NDUFA5P6-201ENST00000542110 379 ntBASIC2.55□□□□□ -2
ZNF28P17035 MIR3129-201ENST00000581095 76 ntBASIC2.55□□□□□ -2
ZNF28P17035 AL022345.2-201ENST00000606307 135 ntBASIC2.55□□□□□ -2
ZNF28P17035 MIR6079-201ENST00000635807 62 ntBASIC2.55□□□□□ -2
ZNF28P17035 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF28P17035 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF28P17035 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF28P17035 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
ZNF28P17035 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF28P17035 MIR548A3-201ENST00000385297 97 ntBASIC2.54□□□□□ -2
ZNF28P17035 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
ZNF28P17035 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
ZNF28P17035 RPS29P6-201ENST00000438196 145 ntBASIC2.54□□□□□ -2
ZNF28P17035 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
ZNF28P17035 AC018868.1-201ENST00000491307 315 ntBASIC2.54□□□□□ -2
ZNF28P17035 AC096725.1-201ENST00000514266 313 ntBASIC2.54□□□□□ -2
ZNF28P17035 RNU6-781P-201ENST00000516377 101 ntBASIC2.54□□□□□ -2
ZNF28P17035 MIR4435-1-201ENST00000582552 80 ntBASIC2.54□□□□□ -2
ZNF28P17035 AL121890.5-201ENST00000620848 304 ntBASIC2.54□□□□□ -2
ZNF28P17035 MIR338-201ENST00000636369 67 ntBASIC2.54□□□□□ -2
ZNF28P17035 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
ZNF28P17035 AC018630.2-201ENST00000534866 2403 ntBASIC2.54□□□□□ -2
ZNF28P17035 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF28P17035 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
ZNF28P17035 RNU6-755P-201ENST00000364400 103 ntBASIC2.53□□□□□ -2
ZNF28P17035 SNORD72-201ENST00000390994 80 ntBASIC2.53□□□□□ -2
ZNF28P17035 AL590004.2-201ENST00000404787 371 ntBASIC2.53□□□□□ -2
ZNF28P17035 Y_RNA.617-201ENST00000410920 90 ntBASIC2.53□□□□□ -2
ZNF28P17035 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
ZNF28P17035 AF228730.3-201ENST00000436691 102 ntBASIC2.53□□□□□ -2
ZNF28P17035 AL513328.1-201ENST00000446460 224 ntBASIC2.53□□□□□ -2
ZNF28P17035 RNU1-142P-201ENST00000516682 145 ntBASIC2.53□□□□□ -2
ZNF28P17035 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
ZNF28P17035 RNU6-1270P-201ENST00000517128 108 ntBASIC2.53□□□□□ -2
ZNF28P17035 AC091544.4-201ENST00000555268 342 ntBASIC2.53□□□□□ -2
ZNF28P17035 MIR3124-201ENST00000582636 67 ntBASIC2.53□□□□□ -2
ZNF28P17035 AL353149.1-201ENST00000610667 244 ntBASIC2.53□□□□□ -2
ZNF28P17035 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF28P17035 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
ZNF28P17035 MTND5P32-201ENST00000560711 1802 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms