Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MIR4703-201ENST00000577728 79 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 AC010205.1-201ENST00000616668 449 ntBASIC-1.2□□□□□ -2.6
HIST1H1DP16402 SNORD114-7-201ENST00000362520 77 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 SNORD95.1-201ENST00000364099 68 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 MIR7-2-201ENST00000384970 110 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 RNU6-855P-201ENST00000410395 104 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 AC108059.2-201ENST00000434626 151 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 AP003168.1-201ENST00000530091 307 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 LRRC34P1-201ENST00000542742 915 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.21□□□□□ -2.6
HIST1H1DP16402 AL512506.1-201ENST00000613918 449 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 AL158209.2-201ENST00000619266 216 ntBASIC-1.21□□□□□ -2.6
HIST1H1DP16402 ZNF299P-201ENST00000406845 1804 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 SNORA1.2-201ENST00000365189 134 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 RNU6-757P-201ENST00000410334 100 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 RNU4-83P-201ENST00000410863 133 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 RNU6-847P-201ENST00000411115 108 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.22□□□□□ -2.6
HIST1H1DP16402 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.22□□□□□ -2.6
HIST1H1DP16402 AL512286.1-201ENST00000439244 400 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 RNU6-475P-201ENST00000516073 104 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 RNU7-181P-201ENST00000517234 74 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 AP001328.1-201ENST00000528550 176 ntBASIC-1.22□□□□□ -2.6
HIST1H1DP16402 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.22□□□□□ -2.6
HIST1H1DP16402 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.22□□□□□ -2.6
HIST1H1DP16402 MIR30D-201ENST00000362283 70 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 RNU6-726P-201ENST00000364680 107 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 RNU6-74P-201ENST00000384235 107 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 RNU6-131P-201ENST00000391144 107 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 SSR1P2-201ENST00000415208 787 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 PIGPP4-201ENST00000584447 307 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 AC005771.1-201ENST00000585581 349 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 AC087685.1-201ENST00000587507 141 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 AP000811.1-201ENST00000603803 651 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 AL355297.3-201ENST00000604082 446 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 AC005828.6-201ENST00000606610 232 ntBASIC-1.23□□□□□ -2.61
HIST1H1DP16402 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 RNU6-490P-201ENST00000362985 107 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 RNU6-291P-201ENST00000384720 107 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 SNORD83B-201ENST00000386745 93 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 AC073464.1-201ENST00000429823 534 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.24□□□□□ -2.61
HIST1H1DP16402 U2.17-201ENST00000611454 95 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 AC009878.1-201ENST00000621819 340 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 AL049777.1-201ENST00000622740 518 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 AC005609.4-201ENST00000625071 447 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 AC093726.3-201ENST00000637588 150 ntBASIC-1.24□□□□□ -2.61
HIST1H1DP16402 RNU6-47P-201ENST00000383866 107 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 MIR153-2-201ENST00000385225 87 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 RNU6-159P-201ENST00000391080 106 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 U8.19-201ENST00000459095 133 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 U8.22-201ENST00000459141 133 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 snoU13.2-201ENST00000459201 104 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 RNU6-107P-201ENST00000516643 102 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 AC022616.4-201ENST00000522985 181 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.25□□□□□ -2.61
HIST1H1DP16402 AL136370.1-201ENST00000608166 691 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 AC099654.13-201ENST00000639774 207 ntBASIC-1.25□□□□□ -2.61
HIST1H1DP16402 SNORA25.10-201ENST00000515926 124 ntBASIC-1.26□□□□□ -2.61
HIST1H1DP16402 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.26□□□□□ -2.61
HIST1H1DP16402 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.26□□□□□ -2.61
HIST1H1DP16402 AL133255.1-201ENST00000606374 441 ntBASIC-1.26□□□□□ -2.61
HIST1H1DP16402 AC064836.2-201ENST00000609491 462 ntBASIC-1.26□□□□□ -2.61
HIST1H1DP16402 RNU6-324P-201ENST00000363957 106 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 SNORD14E-201ENST00000364009 85 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 SNORD38B-201ENST00000384690 67 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 SNORD93-201ENST00000408813 74 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 SPINT5P-201ENST00000448174 155 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.27□□□□□ -2.61
HIST1H1DP16402 RNU6-881P-201ENST00000516813 102 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 POLR3GP1-201ENST00000594073 261 ntBASIC-1.27□□□□□ -2.61
HIST1H1DP16402 RNA5SP368-201ENST00000364298 116 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 RNU6-606P-201ENST00000384721 111 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 MIR516B1-201ENST00000385211 90 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 GPR143P-201ENST00000434155 205 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
HIST1H1DP16402 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.28□□□□□ -2.61
HIST1H1DP16402 RNU6-138P-201ENST00000515952 107 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.28□□□□□ -2.61
HIST1H1DP16402 AC006441.5-201ENST00000612680 209 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 U6.115-201ENST00000636045 103 ntBASIC-1.28□□□□□ -2.61
HIST1H1DP16402 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 SNORA24-201ENST00000384096 131 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 BX276092.1-201ENST00000427368 251 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 AC104850.1-201ENST00000435940 476 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 RPL7P42-201ENST00000481005 679 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 Vault.3-201ENST00000516676 95 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 RNU6-765P-201ENST00000516916 99 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms