Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MTND4P8-201ENST00000514997 1362 ntBASIC-2.3□□□□□ -2.78
VCANP13611 RNU6-509P-201ENST00000363519 107 ntBASIC-2.3□□□□□ -2.78
VCANP13611 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.3□□□□□ -2.78
VCANP13611 RPS29P13-201ENST00000402041 169 ntBASIC-2.3□□□□□ -2.78
VCANP13611 RNU7-62P-201ENST00000458856 62 ntBASIC-2.3□□□□□ -2.78
VCANP13611 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.31□□□□□ -2.78
VCANP13611 RPP40P1-201ENST00000426762 456 ntBASIC-2.31□□□□□ -2.78
VCANP13611 TIMM9P3-201ENST00000428659 274 ntBASIC-2.31□□□□□ -2.78
VCANP13611 MIR548W-201ENST00000581970 74 ntBASIC-2.31□□□□□ -2.78
VCANP13611 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.31□□□□□ -2.78
VCANP13611 AC021851.1-201ENST00000608537 1082 ntBASIC-2.31□□□□□ -2.78
VCANP13611 AC010999.1-201ENST00000611856 324 ntBASIC-2.31□□□□□ -2.78
VCANP13611 AL121978.1-201ENST00000402778 359 ntBASIC-2.31□□□□□ -2.78
VCANP13611 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-2.32□□□□□ -2.78
VCANP13611 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-2.32□□□□□ -2.78
VCANP13611 MTND5P34-201ENST00000568888 325 ntBASIC-2.32□□□□□ -2.78
VCANP13611 MIR4473-201ENST00000583731 91 ntBASIC-2.32□□□□□ -2.78
VCANP13611 RNU6-873P-201ENST00000363833 107 ntBASIC-2.32□□□□□ -2.78
VCANP13611 MT-TN-201ENST00000387400 73 ntBASIC-2.32□□□□□ -2.78
VCANP13611 AL356055.1-201ENST00000602528 446 ntBASIC-2.32□□□□□ -2.78
VCANP13611 SNORA33-201ENST00000363664 130 ntBASIC-2.32□□□□□ -2.78
VCANP13611 RNU6-440P-201ENST00000390882 105 ntBASIC-2.32□□□□□ -2.78
VCANP13611 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-2.32□□□□□ -2.78
VCANP13611 snoU13.10-201ENST00000459301 103 ntBASIC-2.32□□□□□ -2.78
VCANP13611 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.32□□□□□ -2.78
VCANP13611 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-2.32□□□□□ -2.78
VCANP13611 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-2.32□□□□□ -2.78
VCANP13611 SNORA27.3-201ENST00000364937 134 ntBASIC-2.33□□□□□ -2.78
VCANP13611 RNU6-424P-201ENST00000384367 105 ntBASIC-2.33□□□□□ -2.78
VCANP13611 MIR548Y-201ENST00000582739 110 ntBASIC-2.33□□□□□ -2.78
VCANP13611 AC099785.1-201ENST00000605697 437 ntBASIC-2.33□□□□□ -2.78
VCANP13611 RNU6-653P-201ENST00000363074 106 ntBASIC-2.33□□□□□ -2.78
VCANP13611 SNORD115-4-201ENST00000363810 82 ntBASIC-2.33□□□□□ -2.78
VCANP13611 RNU2-11P-201ENST00000459191 187 ntBASIC-2.33□□□□□ -2.78
VCANP13611 RNU6-943P-201ENST00000516960 98 ntBASIC-2.33□□□□□ -2.78
VCANP13611 MIR4264-201ENST00000583520 66 ntBASIC-2.33□□□□□ -2.78
VCANP13611 RNU6-227P-201ENST00000362865 103 ntBASIC-2.33□□□□□ -2.78
VCANP13611 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.33□□□□□ -2.78
VCANP13611 AC011603.4-201ENST00000611325 277 ntBASIC-2.33□□□□□ -2.78
VCANP13611 MIR20A-201ENST00000362279 71 ntBASIC-2.34□□□□□ -2.78
VCANP13611 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.34□□□□□ -2.78
VCANP13611 SNORA49-201ENST00000386157 136 ntBASIC-2.34□□□□□ -2.78
VCANP13611 RNU6-319P-201ENST00000516025 108 ntBASIC-2.34□□□□□ -2.78
VCANP13611 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-2.34□□□□□ -2.78
VCANP13611 RNU6-208P-201ENST00000362431 107 ntBASIC-2.34□□□□□ -2.78
VCANP13611 RNU6-545P-201ENST00000362681 104 ntBASIC-2.34□□□□□ -2.78
VCANP13611 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.34□□□□□ -2.78
VCANP13611 snoU13.14-201ENST00000459372 104 ntBASIC-2.34□□□□□ -2.78
VCANP13611 AC104629.2-201ENST00000468627 598 ntBASIC-2.34□□□□□ -2.78
VCANP13611 AC145423.2-201ENST00000610631 239 ntBASIC-2.34□□□□□ -2.78
VCANP13611 RNU6-1200P-201ENST00000384162 107 ntBASIC-2.35□□□□□ -2.78
VCANP13611 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-2.35□□□□□ -2.78
VCANP13611 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-2.35□□□□□ -2.78
VCANP13611 MRPS36P5-201ENST00000551909 298 ntBASIC-2.35□□□□□ -2.78
VCANP13611 AC073648.5-201ENST00000603502 305 ntBASIC-2.35□□□□□ -2.78
VCANP13611 Z97988.1-201ENST00000637697 135 ntBASIC-2.35□□□□□ -2.78
VCANP13611 MIR539-201ENST00000365690 78 ntBASIC-2.35□□□□□ -2.79
VCANP13611 RNU6-926P-201ENST00000384075 107 ntBASIC-2.35□□□□□ -2.79
VCANP13611 SNORD51-201ENST00000384320 80 ntBASIC-2.35□□□□□ -2.79
VCANP13611 FGF7P4-201ENST00000509595 295 ntBASIC-2.35□□□□□ -2.79
VCANP13611 RNU2-9P-201ENST00000410194 145 ntBASIC-2.35□□□□□ -2.79
VCANP13611 AL592310.1-201ENST00000414330 671 ntBASIC-2.35□□□□□ -2.79
VCANP13611 RNU7-43P-201ENST00000516554 64 ntBASIC-2.35□□□□□ -2.79
VCANP13611 RNU6-107P-201ENST00000516643 102 ntBASIC-2.35□□□□□ -2.79
VCANP13611 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 SNORA12.2-201ENST00000391040 156 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.36□□□□□ -2.79
VCANP13611 MTND4P21-201ENST00000453886 1357 ntBASIC-2.36□□□□□ -2.79
VCANP13611 MRPL42P3-201ENST00000401492 326 ntBASIC-2.36□□□□□ -2.79
VCANP13611 RNU1-142P-201ENST00000516682 145 ntBASIC-2.36□□□□□ -2.79
VCANP13611 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-2.36□□□□□ -2.79
VCANP13611 SNORD115-16-201ENST00000363887 82 ntBASIC-2.36□□□□□ -2.79
VCANP13611 SNORA32.2-201ENST00000384049 122 ntBASIC-2.36□□□□□ -2.79
VCANP13611 AL391834.2-201ENST00000609982 546 ntBASIC-2.36□□□□□ -2.79
VCANP13611 RNU6-694P-201ENST00000364071 147 ntBASIC-2.37□□□□□ -2.79
VCANP13611 RNU6-690P-201ENST00000365242 106 ntBASIC-2.37□□□□□ -2.79
VCANP13611 SNORD14.1-201ENST00000365609 90 ntBASIC-2.37□□□□□ -2.79
VCANP13611 RNU6-1226P-201ENST00000384317 107 ntBASIC-2.37□□□□□ -2.79
VCANP13611 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.37□□□□□ -2.79
VCANP13611 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.37□□□□□ -2.79
VCANP13611 AC244090.1-201ENST00000441884 93 ntBASIC-2.37□□□□□ -2.79
VCANP13611 AC005178.1-201ENST00000508392 440 ntBASIC-2.37□□□□□ -2.79
VCANP13611 ELOCP14-201ENST00000428070 331 ntBASIC-2.37□□□□□ -2.79
VCANP13611 ELOCP7-201ENST00000439968 331 ntBASIC-2.37□□□□□ -2.79
VCANP13611 RNU2-23P-201ENST00000410545 195 ntBASIC-2.38□□□□□ -2.79
VCANP13611 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-2.38□□□□□ -2.79
VCANP13611 AC079781.2-201ENST00000446424 169 ntBASIC-2.38□□□□□ -2.79
VCANP13611 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.38□□□□□ -2.79
VCANP13611 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-2.38□□□□□ -2.79
VCANP13611 MIR548AR-201ENST00000582191 57 ntBASIC-2.38□□□□□ -2.79
VCANP13611 RNA5SP237-201ENST00000410414 113 ntBASIC-2.38□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms