Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MTCO3P23-201ENST00000561363 289 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 MIR4677-201ENST00000584153 80 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 MIR4639-201ENST00000584938 69 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 AL590491.3-201ENST00000610731 82 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 MIR6740-201ENST00000618268 113 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 MIR6738-201ENST00000619620 64 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.18□□□□□ -2.6
CFTRP13569 SNORD114-14-201ENST00000362723 75 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 AC073464.1-201ENST00000429823 534 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 AC091959.1-201ENST00000495857 238 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 SNORA31.14-201ENST00000516728 116 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.19□□□□□ -2.6
CFTRP13569 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.19□□□□□ -2.6
CFTRP13569 uc_338.11-201ENST00000619132 160 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 AC134878.1-201ENST00000619901 243 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 AC244669.1-204ENST00000621564 178 ntBASIC-1.19□□□□□ -2.6
CFTRP13569 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.2□□□□□ -2.6
CFTRP13569 RNU6-169P-201ENST00000365336 107 ntBASIC-1.2□□□□□ -2.6
CFTRP13569 AC091179.3-201ENST00000474761 144 ntBASIC-1.2□□□□□ -2.6
CFTRP13569 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.2□□□□□ -2.6
CFTRP13569 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 SNORD83B-201ENST00000386745 93 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 SNORA3B-201ENST00000391305 131 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 AC090844.1-201ENST00000422019 156 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 RNU6-329P-201ENST00000459618 107 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFTRP13569 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFTRP13569 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 SCARNA17-201ENST00000516183 144 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFTRP13569 AC005771.1-201ENST00000585581 349 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 SEPT14P19-203ENST00000633205 211 ntBASIC-1.21□□□□□ -2.6
CFTRP13569 RNU6-280P-201ENST00000364145 104 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 SNORD38B-201ENST00000384690 67 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.22□□□□□ -2.6
CFTRP13569 AL354751.2-201ENST00000415471 210 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 AL008987.1-201ENST00000415528 237 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.22□□□□□ -2.6
CFTRP13569 AC244250.2-201ENST00000418731 148 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.22□□□□□ -2.6
CFTRP13569 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.22□□□□□ -2.6
CFTRP13569 MIR378D2-201ENST00000580636 98 ntBASIC-1.22□□□□□ -2.6
CFTRP13569 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 SNORA75.4-201ENST00000391278 119 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 RNU6-847P-201ENST00000411115 108 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 AC016550.1-201ENST00000505348 785 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 AC080013.3-201ENST00000606839 578 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 AL049777.1-201ENST00000622740 518 ntBASIC-1.23□□□□□ -2.61
CFTRP13569 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 MIR588-201ENST00000384900 83 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU6-131P-201ENST00000391144 107 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 MIR873-201ENST00000401120 77 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU7-138P-201ENST00000459479 64 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AC010424.1-201ENST00000506336 297 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU6-830P-201ENST00000516353 107 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AC105029.1-201ENST00000520250 669 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AC010205.1-201ENST00000616668 449 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU6-489P-201ENST00000618289 107 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 SNORA1.2-201ENST00000365189 134 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU6-784P-201ENST00000384330 106 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 RNU6-541P-201ENST00000384709 110 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 MTCO2P27-201ENST00000420740 428 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.24□□□□□ -2.61
CFTRP13569 AL512286.1-201ENST00000439244 400 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 SPINT5P-201ENST00000448174 155 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AL138752.1-201ENST00000452964 351 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AC105417.1-201ENST00000514691 285 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AC090572.1-201ENST00000519251 160 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 AC245008.1-201ENST00000608123 476 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.24□□□□□ -2.61
CFTRP13569 MIR6507-201ENST00000613630 70 ntBASIC-1.24□□□□□ -2.61
CFTRP13569 ZNF299P-201ENST00000406845 1804 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.25□□□□□ -2.61
CFTRP13569 SSR1P2-201ENST00000415208 787 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.25□□□□□ -2.61
CFTRP13569 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.25□□□□□ -2.61
CFTRP13569 RNU7-167P-201ENST00000459160 62 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 SNORA70.25-201ENST00000612741 95 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 AC084368.1-201ENST00000620935 65 ntBASIC-1.25□□□□□ -2.61
CFTRP13569 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.26□□□□□ -2.61
CFTRP13569 RNU6-740P-201ENST00000364734 105 ntBASIC-1.26□□□□□ -2.61
CFTRP13569 FCF1P9-201ENST00000412546 282 ntBASIC-1.26□□□□□ -2.61
CFTRP13569 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.26□□□□□ -2.61
CFTRP13569 snoU13.16-201ENST00000459350 104 ntBASIC-1.26□□□□□ -2.61
CFTRP13569 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.26□□□□□ -2.61
CFTRP13569 RNU7-181P-201ENST00000517234 74 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms