Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC073349.3-201ENST00000617616 186 ntBASIC1.73□□□□□ -2.13
CDH1P12830 MIR548AY-201ENST00000617669 107 ntBASIC1.73□□□□□ -2.13
CDH1P12830 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CDH1P12830 AC018630.2-201ENST00000534866 2403 ntBASIC1.72□□□□□ -2.13
CDH1P12830 RNU6-899P-201ENST00000363947 107 ntBASIC1.72□□□□□ -2.13
CDH1P12830 RNU6-1019P-201ENST00000364424 107 ntBASIC1.72□□□□□ -2.13
CDH1P12830 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
CDH1P12830 U8.13-201ENST00000390842 128 ntBASIC1.72□□□□□ -2.13
CDH1P12830 MIR1289-2-201ENST00000408360 111 ntBASIC1.72□□□□□ -2.13
CDH1P12830 AC108059.2-201ENST00000434626 151 ntBASIC1.72□□□□□ -2.13
CDH1P12830 AL606517.2-201ENST00000442855 241 ntBASIC1.72□□□□□ -2.13
CDH1P12830 RPS27P1-201ENST00000450552 247 ntBASIC1.72□□□□□ -2.13
CDH1P12830 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH1P12830 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
CDH1P12830 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH1P12830 AC024405.2-202ENST00000532731 184 ntBASIC1.72□□□□□ -2.13
CDH1P12830 POLR3GP1-201ENST00000594073 261 ntBASIC1.72□□□□□ -2.13
CDH1P12830 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
CDH1P12830 MIR6079-201ENST00000635807 62 ntBASIC1.72□□□□□ -2.13
CDH1P12830 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
CDH1P12830 AP006437.1-201ENST00000641440 3685 ntBASIC1.71□□□□□ -2.14
CDH1P12830 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDH1P12830 RNU4-13P-201ENST00000364019 141 ntBASIC1.71□□□□□ -2.14
CDH1P12830 MIR520G-201ENST00000385064 90 ntBASIC1.71□□□□□ -2.14
CDH1P12830 snoU13.26-201ENST00000459452 105 ntBASIC1.71□□□□□ -2.14
CDH1P12830 RNU7-116P-201ENST00000516940 62 ntBASIC1.71□□□□□ -2.14
CDH1P12830 RNU6-1096P-201ENST00000517089 102 ntBASIC1.71□□□□□ -2.14
CDH1P12830 AC127455.1-201ENST00000565496 145 ntBASIC1.71□□□□□ -2.14
CDH1P12830 AC130289.1-201ENST00000577321 73 ntBASIC1.71□□□□□ -2.14
CDH1P12830 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
CDH1P12830 AC022217.4-201ENST00000604389 163 ntBASIC1.71□□□□□ -2.14
CDH1P12830 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH1P12830 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDH1P12830 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDH1P12830 SNORA63D-201ENST00000364359 132 ntBASIC1.7□□□□□ -2.14
CDH1P12830 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
CDH1P12830 SNORA72-201ENST00000384339 132 ntBASIC1.7□□□□□ -2.14
CDH1P12830 Y_RNA.515-201ENST00000384535 112 ntBASIC1.7□□□□□ -2.14
CDH1P12830 MIR1298-201ENST00000408783 112 ntBASIC1.7□□□□□ -2.14
CDH1P12830 SNORA36B-201ENST00000410438 131 ntBASIC1.7□□□□□ -2.14
CDH1P12830 Y_RNA.626-201ENST00000411288 95 ntBASIC1.7□□□□□ -2.14
CDH1P12830 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH1P12830 COX6CP14-201ENST00000469580 174 ntBASIC1.7□□□□□ -2.14
CDH1P12830 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH1P12830 RNU6-341P-201ENST00000516973 96 ntBASIC1.7□□□□□ -2.14
CDH1P12830 AC100821.1-201ENST00000523153 2479 ntBASIC1.7□□□□□ -2.14
CDH1P12830 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.7□□□□□ -2.14
CDH1P12830 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.7□□□□□ -2.14
CDH1P12830 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
CDH1P12830 AL365265.1-201ENST00000621045 234 ntBASIC1.7□□□□□ -2.14
CDH1P12830 AC084768.2-201ENST00000622736 221 ntBASIC1.7□□□□□ -2.14
CDH1P12830 RNU6-653P-201ENST00000363074 106 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
CDH1P12830 Y_RNA.200-201ENST00000364018 102 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNU6-296P-201ENST00000384608 107 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNU11-5P-201ENST00000391216 129 ntBASIC1.69□□□□□ -2.14
CDH1P12830 AL512604.1-201ENST00000404812 257 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNA5SP100-201ENST00000410903 110 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNA5SP59-201ENST00000410922 110 ntBASIC1.69□□□□□ -2.14
CDH1P12830 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH1P12830 RNU7-94P-201ENST00000459576 63 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RPL23AP42-201ENST00000471152 471 ntBASIC1.69□□□□□ -2.14
CDH1P12830 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH1P12830 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNU6-1291P-201ENST00000516591 104 ntBASIC1.69□□□□□ -2.14
CDH1P12830 RNU6-295P-201ENST00000516901 104 ntBASIC1.69□□□□□ -2.14
CDH1P12830 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.69□□□□□ -2.14
CDH1P12830 AC100767.1-201ENST00000528178 123 ntBASIC1.69□□□□□ -2.14
CDH1P12830 AC011604.1-201ENST00000545978 196 ntBASIC1.69□□□□□ -2.14
CDH1P12830 DEFB122-202ENST00000569013 197 ntBASIC1.69□□□□□ -2.14
CDH1P12830 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
CDH1P12830 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.69□□□□□ -2.14
CDH1P12830 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.69□□□□□ -2.14
CDH1P12830 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CDH1P12830 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH1P12830 RNU6-1205P-201ENST00000363625 106 ntBASIC1.68□□□□□ -2.14
CDH1P12830 RNU4-10P-201ENST00000364383 140 ntBASIC1.68□□□□□ -2.14
CDH1P12830 Y_RNA.274-201ENST00000364714 101 ntBASIC1.68□□□□□ -2.14
CDH1P12830 RNU6-144P-201ENST00000383951 107 ntBASIC1.68□□□□□ -2.14
CDH1P12830 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH1P12830 RPL23AP54-201ENST00000495129 419 ntBASIC1.68□□□□□ -2.14
CDH1P12830 AL929325.1-201ENST00000603096 117 ntBASIC1.68□□□□□ -2.14
CDH1P12830 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH1P12830 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CDH1P12830 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CDH1P12830 RNA5SP276-201ENST00000362580 94 ntBASIC1.67□□□□□ -2.14
CDH1P12830 Y_RNA.199-201ENST00000364014 102 ntBASIC1.67□□□□□ -2.14
CDH1P12830 Y_RNA.267-201ENST00000364679 109 ntBASIC1.67□□□□□ -2.14
CDH1P12830 RNU6-200P-201ENST00000364743 107 ntBASIC1.67□□□□□ -2.14
CDH1P12830 Y_RNA.293-201ENST00000364908 93 ntBASIC1.67□□□□□ -2.14
CDH1P12830 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
CDH1P12830 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CDH1P12830 AC245047.3-201ENST00000429428 127 ntBASIC1.67□□□□□ -2.14
CDH1P12830 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.67□□□□□ -2.14
CDH1P12830 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.67□□□□□ -2.14
CDH1P12830 RNU6-138P-201ENST00000515952 107 ntBASIC1.67□□□□□ -2.14
CDH1P12830 RNY3P16-201ENST00000516338 101 ntBASIC1.67□□□□□ -2.14
CDH1P12830 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.67□□□□□ -2.14
CDH1P12830 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms