Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 Y_RNA.362-201ENST00000365518 110 ntBASIC3.14□□□□□ -1.91
BMP3P12645 MIR590-201ENST00000385008 97 ntBASIC3.14□□□□□ -1.91
BMP3P12645 MIR767-201ENST00000390228 109 ntBASIC3.14□□□□□ -1.91
BMP3P12645 RNU6-1275P-201ENST00000391087 107 ntBASIC3.14□□□□□ -1.91
BMP3P12645 AP000567.1-201ENST00000406413 156 ntBASIC3.14□□□□□ -1.91
BMP3P12645 Y_RNA.621-201ENST00000411065 96 ntBASIC3.14□□□□□ -1.91
BMP3P12645 RPS29P6-201ENST00000438196 145 ntBASIC3.14□□□□□ -1.91
BMP3P12645 RPS26P48-201ENST00000491713 339 ntBASIC3.14□□□□□ -1.91
BMP3P12645 SNORA31.1-201ENST00000515993 133 ntBASIC3.14□□□□□ -1.91
BMP3P12645 RNU6-693P-201ENST00000516134 107 ntBASIC3.14□□□□□ -1.91
BMP3P12645 SNORA31.5-201ENST00000516190 133 ntBASIC3.14□□□□□ -1.91
BMP3P12645 RNU6-965P-201ENST00000516721 96 ntBASIC3.14□□□□□ -1.91
BMP3P12645 AP003327.1-201ENST00000529684 127 ntBASIC3.14□□□□□ -1.91
BMP3P12645 AL442128.1-201ENST00000615151 90 ntBASIC3.14□□□□□ -1.91
BMP3P12645 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
BMP3P12645 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
BMP3P12645 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
BMP3P12645 RNA5SP295-201ENST00000362655 121 ntBASIC3.13□□□□□ -1.91
BMP3P12645 RNU1-105P-201ENST00000363470 161 ntBASIC3.13□□□□□ -1.91
BMP3P12645 RNU1-96P-201ENST00000364163 162 ntBASIC3.13□□□□□ -1.91
BMP3P12645 RNY1P7-201ENST00000384743 110 ntBASIC3.13□□□□□ -1.91
BMP3P12645 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
BMP3P12645 AC009414.1-201ENST00000427200 443 ntBASIC3.13□□□□□ -1.91
BMP3P12645 SNRPGP10-201ENST00000432323 225 ntBASIC3.13□□□□□ -1.91
BMP3P12645 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.13□□□□□ -1.91
BMP3P12645 MRPS36P2-201ENST00000512569 299 ntBASIC3.13□□□□□ -1.91
BMP3P12645 RNU6-240P-201ENST00000516098 97 ntBASIC3.13□□□□□ -1.91
BMP3P12645 SCARNA17.1-201ENST00000516211 143 ntBASIC3.13□□□□□ -1.91
BMP3P12645 SCARNA17.2-201ENST00000516334 143 ntBASIC3.13□□□□□ -1.91
BMP3P12645 RNA5SP490-201ENST00000517141 136 ntBASIC3.13□□□□□ -1.91
BMP3P12645 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.13□□□□□ -1.91
BMP3P12645 AC104984.5-201ENST00000586878 94 ntBASIC3.13□□□□□ -1.91
BMP3P12645 AC073413.2-201ENST00000604332 360 ntBASIC3.13□□□□□ -1.91
BMP3P12645 SCARNA17.4-201ENST00000614296 143 ntBASIC3.13□□□□□ -1.91
BMP3P12645 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
BMP3P12645 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
BMP3P12645 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.12□□□□□ -1.91
BMP3P12645 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BMP3P12645 RNY4P6-201ENST00000363667 96 ntBASIC3.12□□□□□ -1.91
BMP3P12645 RNA5SP173-201ENST00000364857 136 ntBASIC3.12□□□□□ -1.91
BMP3P12645 RNU6-1083P-201ENST00000384022 107 ntBASIC3.12□□□□□ -1.91
BMP3P12645 MIR518F-201ENST00000384973 87 ntBASIC3.12□□□□□ -1.91
BMP3P12645 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
BMP3P12645 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
BMP3P12645 MIR5009-201ENST00000578736 100 ntBASIC3.12□□□□□ -1.91
BMP3P12645 MIR3605-201ENST00000583214 100 ntBASIC3.12□□□□□ -1.91
BMP3P12645 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.12□□□□□ -1.91
BMP3P12645 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BMP3P12645 SNORA19.1-201ENST00000410656 129 ntBASIC3.11□□□□□ -1.91
BMP3P12645 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
BMP3P12645 AC009969.1-201ENST00000438726 172 ntBASIC3.11□□□□□ -1.91
BMP3P12645 SNRPGP13-201ENST00000442212 177 ntBASIC3.11□□□□□ -1.91
BMP3P12645 MIR5197-201ENST00000583721 112 ntBASIC3.11□□□□□ -1.91
BMP3P12645 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.11□□□□□ -1.91
BMP3P12645 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BMP3P12645 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
BMP3P12645 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BMP3P12645 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
BMP3P12645 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BMP3P12645 MT-TI-201ENST00000387365 69 ntBASIC3.1□□□□□ -1.91
BMP3P12645 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BMP3P12645 MIR1253-201ENST00000408273 105 ntBASIC3.1□□□□□ -1.91
BMP3P12645 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
BMP3P12645 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
BMP3P12645 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
BMP3P12645 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
BMP3P12645 RNU6-830P-201ENST00000516353 107 ntBASIC3.1□□□□□ -1.91
BMP3P12645 SNORA9.3-201ENST00000516383 129 ntBASIC3.1□□□□□ -1.91
BMP3P12645 RNU6-638P-201ENST00000516582 104 ntBASIC3.1□□□□□ -1.91
BMP3P12645 RNY4P20-201ENST00000516678 93 ntBASIC3.1□□□□□ -1.91
BMP3P12645 RNU6-856P-201ENST00000516959 98 ntBASIC3.1□□□□□ -1.91
BMP3P12645 RNU7-128P-201ENST00000517247 62 ntBASIC3.1□□□□□ -1.91
BMP3P12645 AC068339.1-201ENST00000526965 141 ntBASIC3.1□□□□□ -1.91
BMP3P12645 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.1□□□□□ -1.91
BMP3P12645 Y_RNA.818-201ENST00000618813 71 ntBASIC3.1□□□□□ -1.91
BMP3P12645 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
BMP3P12645 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
BMP3P12645 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.1□□□□□ -1.91
BMP3P12645 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
BMP3P12645 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BMP3P12645 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
BMP3P12645 RNA5SP68-201ENST00000363885 119 ntBASIC3.09□□□□□ -1.91
BMP3P12645 RNU6-573P-201ENST00000383938 106 ntBASIC3.09□□□□□ -1.91
BMP3P12645 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BMP3P12645 AC060773.1-201ENST00000421698 310 ntBASIC3.09□□□□□ -1.91
BMP3P12645 MTATP8P2-201ENST00000435212 202 ntBASIC3.09□□□□□ -1.91
BMP3P12645 AC233266.1-201ENST00000454518 96 ntBASIC3.09□□□□□ -1.91
BMP3P12645 RNU6-158P-201ENST00000517104 100 ntBASIC3.09□□□□□ -1.91
BMP3P12645 IGKV3-31-201ENST00000523109 329 ntBASIC3.09□□□□□ -1.91
BMP3P12645 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.09□□□□□ -1.91
BMP3P12645 AC242852.1-201ENST00000612151 96 ntBASIC3.09□□□□□ -1.91
BMP3P12645 AC244015.1-201ENST00000622301 99 ntBASIC3.09□□□□□ -1.91
BMP3P12645 MIR1245B-201ENST00000636115 69 ntBASIC3.09□□□□□ -1.91
BMP3P12645 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
BMP3P12645 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
BMP3P12645 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BMP3P12645 AC091564.4-201ENST00000533934 2194 ntBASIC3.08□□□□□ -1.92
BMP3P12645 MIR340-201ENST00000362125 95 ntBASIC3.08□□□□□ -1.92
BMP3P12645 Y_RNA.78-201ENST00000362970 110 ntBASIC3.08□□□□□ -1.92
BMP3P12645 RNU6-414P-201ENST00000363705 104 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms