Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORA70.25-201ENST00000612741 95 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 uc_338.10-201ENST00000621872 182 ntBASIC-0.56□□□□□ -2.5
COL6A3P12111 RNU4-66P-201ENST00000365199 138 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 SNORD65.1-201ENST00000390889 71 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL6A3P12111 MTATP6P17-201ENST00000431030 672 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 MTCO1P27-201ENST00000448269 226 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.57□□□□□ -2.5
COL6A3P12111 snoU13.16-201ENST00000459350 104 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.57□□□□□ -2.5
COL6A3P12111 MTND1P8-201ENST00000571424 950 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC091178.2-201ENST00000584401 117 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AP000907.4-201ENST00000604143 237 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 RNU6-502P-201ENST00000362419 108 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 SNORD114-29-201ENST00000364819 70 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 RNY3P13-201ENST00000365542 102 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 SNORD24-201ENST00000383884 75 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 RNU6-817P-201ENST00000391083 104 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 SNAP23P1-201ENST00000433229 246 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL6A3P12111 AC026414.1-201ENST00000504046 698 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 SNORD22.1-201ENST00000516331 125 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 RNA5SP47-201ENST00000517230 109 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC068587.5-201ENST00000528506 175 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AL358944.1-201ENST00000528537 144 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
COL6A3P12111 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL6A3P12111 AC124016.2-201ENST00000610058 665 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.57□□□□□ -2.5
COL6A3P12111 MIR6740-201ENST00000618268 113 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 USP9YP16-201ENST00000430287 407 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.57□□□□□ -2.5
COL6A3P12111 snoU83B.1-201ENST00000517136 88 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.57□□□□□ -2.5
COL6A3P12111 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC087894.1-201ENST00000538359 518 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL6A3P12111 AC011458.1-201ENST00000604034 617 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC091965.4-201ENST00000607691 587 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 AC131235.4-201ENST00000609288 620 ntBASIC-0.57□□□□□ -2.5
COL6A3P12111 SNORD56.4-201ENST00000363883 71 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 MIR208B-201ENST00000401172 77 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 RNU6-759P-201ENST00000516740 103 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AP003733.2-201ENST00000529409 171 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AC138749.4-201ENST00000563970 127 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AC097478.2-201ENST00000610572 514 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AC253576.2-201ENST00000618815 580 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 MIR9-2-201ENST00000384838 87 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.58□□□□□ -2.5
COL6A3P12111 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AP000533.3-201ENST00000447704 118 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 GMFBP1-201ENST00000467831 427 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AC012409.4-201ENST00000612923 249 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 MIR8066-201ENST00000617280 78 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 AC091948.2-201ENST00000636510 279 ntBASIC-0.58□□□□□ -2.5
COL6A3P12111 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
COL6A3P12111 SNORD65C-201ENST00000390962 71 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 SNORD41.1-201ENST00000391000 69 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 SNORA26.5-201ENST00000391215 123 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU7-172P-201ENST00000517125 64 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AC022784.5-201ENST00000522241 437 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MIR6082-201ENST00000613604 109 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MIR6502-201ENST00000617296 76 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AL049777.1-201ENST00000622740 518 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-384P-201ENST00000364900 104 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-549P-201ENST00000384433 107 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL6A3P12111 SCARNA18B-201ENST00000458806 135 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU2-11P-201ENST00000459191 187 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.59□□□□□ -2.5
COL6A3P12111 AC131281.1-201ENST00000522984 164 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MIR544B-201ENST00000582372 78 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MIR548AC-201ENST00000585049 88 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 BNIP3P40-201ENST00000596017 556 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-403P-201ENST00000363163 104 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 SNORD113-7-201ENST00000363762 77 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RNU6-855P-201ENST00000410395 104 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MTND3P8-201ENST00000412909 339 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 RPL23AP30-201ENST00000432419 501 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 SNRPGP14-201ENST00000435400 219 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MTND2P20-201ENST00000440805 661 ntBASIC-0.59□□□□□ -2.5
COL6A3P12111 MTND4P18-201ENST00000447010 465 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms