Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNA5SP511-201ENST00000410487 115 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 AC104332.1-201ENST00000440471 797 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 RPS26P55-201ENST00000471178 356 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 RPS27P22-201ENST00000478056 241 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 AC005840.1-201ENST00000498412 377 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXC6P09630 SNORA70.12-201ENST00000516084 153 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 CYCSP26-201ENST00000534107 320 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC6P09630 RNU2-4P-201ENST00000606190 192 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 SNORD14A-201ENST00000606526 91 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 AC004832.4-201ENST00000608952 331 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.01□□□□□ -2.09
HOXC6P09630 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC6P09630 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HOXC6P09630 Y_RNA.24-201ENST00000362508 103 ntBASIC2□□□□□ -2.09
HOXC6P09630 RNU6-774P-201ENST00000363238 107 ntBASIC2□□□□□ -2.09
HOXC6P09630 snoU2_19.4-201ENST00000364329 80 ntBASIC2□□□□□ -2.09
HOXC6P09630 RNU4-70P-201ENST00000384579 139 ntBASIC2□□□□□ -2.09
HOXC6P09630 RNU6-417P-201ENST00000384712 107 ntBASIC2□□□□□ -2.09
HOXC6P09630 RNU6-383P-201ENST00000410864 94 ntBASIC2□□□□□ -2.09
HOXC6P09630 AC009238.1-201ENST00000442165 424 ntBASIC2□□□□□ -2.09
HOXC6P09630 AL357134.1-201ENST00000445848 426 ntBASIC2□□□□□ -2.09
HOXC6P09630 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2□□□□□ -2.09
HOXC6P09630 AC009237.6-201ENST00000446969 424 ntBASIC2□□□□□ -2.09
HOXC6P09630 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2□□□□□ -2.09
HOXC6P09630 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2□□□□□ -2.09
HOXC6P09630 RNU6-1041P-201ENST00000516254 102 ntBASIC2□□□□□ -2.09
HOXC6P09630 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
HOXC6P09630 AC100767.1-201ENST00000528178 123 ntBASIC2□□□□□ -2.09
HOXC6P09630 MIR3684-201ENST00000579779 74 ntBASIC2□□□□□ -2.09
HOXC6P09630 AL078604.3-201ENST00000615580 211 ntBASIC2□□□□□ -2.09
HOXC6P09630 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
HOXC6P09630 RNU6-899P-201ENST00000363947 107 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 SNORD23.1-201ENST00000408212 104 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 AC008134.1-201ENST00000420943 193 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 RNU6-453P-201ENST00000516819 85 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 RNU6-856P-201ENST00000516959 98 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 DNAJC19P9-201ENST00000555084 351 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 AC072026.1-201ENST00000605023 201 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 MIR8070-201ENST00000616510 88 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HOXC6P09630 AL159152.1-201ENST00000635019 2587 ntBASIC1.99□□□□□ -2.09
HOXC6P09630 SNORD114-7-201ENST00000362520 77 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 SNORD115-3-201ENST00000363100 82 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 SNORA3A-201ENST00000364113 130 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXC6P09630 Y_RNA.571-201ENST00000384753 98 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 RNA5SP467-201ENST00000391274 118 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 MIR1253-201ENST00000408273 105 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 HMGN2P34-201ENST00000437647 269 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 HSPE1P13-201ENST00000451143 297 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 AC011406.1-201ENST00000512440 370 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 TRMT112P2-201ENST00000512910 132 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 SCARNA8-201ENST00000515924 131 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 Y_RNA.662-201ENST00000516028 97 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 RNU7-115P-201ENST00000516433 55 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 RNU6-255P-201ENST00000516957 105 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 MRPS18CP4-201ENST00000535821 231 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 NDUFA5P6-201ENST00000542110 379 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC6P09630 MIR4438-201ENST00000585271 93 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 POLR3GP1-201ENST00000594073 261 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 AC104465.1-201ENST00000611365 139 ntBASIC1.98□□□□□ -2.09
HOXC6P09630 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HOXC6P09630 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
HOXC6P09630 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HOXC6P09630 RNU6-1205P-201ENST00000363625 106 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 RNU6-271P-201ENST00000363858 105 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 RNU6-117P-201ENST00000365415 107 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 RNU6-969P-201ENST00000383900 105 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 MT-TT-201ENST00000387460 66 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 AL603908.1-201ENST00000406098 201 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 RNU6-1186P-201ENST00000410429 97 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 SNORA36B-201ENST00000410438 131 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXC6P09630 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXC6P09630 RNU2-34P-201ENST00000516534 121 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXC6P09630 AC015720.1-201ENST00000565251 277 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 AC005972.2-201ENST00000604690 348 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 MIR548AY-201ENST00000617669 107 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 MIR7111-201ENST00000619751 72 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 AC021753.1-201ENST00000635724 168 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 U6.106-201ENST00000636360 105 ntBASIC1.97□□□□□ -2.09
HOXC6P09630 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HOXC6P09630 Y_RNA.7-201ENST00000362352 102 ntBASIC1.96□□□□□ -2.1
HOXC6P09630 Y_RNA.8-201ENST00000362353 102 ntBASIC1.96□□□□□ -2.1
HOXC6P09630 RNU1-22P-201ENST00000363334 158 ntBASIC1.96□□□□□ -2.1
HOXC6P09630 SNORA33-201ENST00000363664 130 ntBASIC1.96□□□□□ -2.1
HOXC6P09630 RNU4-17P-201ENST00000365598 141 ntBASIC1.96□□□□□ -2.1
HOXC6P09630 MIR499A-201ENST00000384903 122 ntBASIC1.96□□□□□ -2.1
HOXC6P09630 RNU6-381P-201ENST00000391259 108 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms