Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC117470.1-201ENST00000381974 330 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 Y_RNA.554-201ENST00000384672 102 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 MIR526A1-201ENST00000384897 85 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 MTND2P22-201ENST00000444325 1033 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 AC114811.1-201ENST00000507207 168 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.36□□□□□ -2.35
COL4A2P08572 RNU6-63P-201ENST00000516690 95 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 RNU6-1314P-201ENST00000517139 104 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 Z83818.1-201ENST00000603584 150 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 AC007014.2-201ENST00000615581 479 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 PISRT1.1-201ENST00000616930 107 ntBASIC0.36□□□□□ -2.35
COL4A2P08572 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL4A2P08572 Y_RNA.89-201ENST00000363031 102 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 SNORD113.3-201ENST00000364630 78 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 Y_RNA.336-201ENST00000365307 109 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RNU6-1050P-201ENST00000410388 107 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RNU6-1001P-201ENST00000411265 100 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RPS3AP1-201ENST00000413190 320 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.35□□□□□ -2.35
COL4A2P08572 AL392103.1-201ENST00000447000 198 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 MTND1P17-201ENST00000448961 204 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC104692.1-201ENST00000472406 90 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC098869.1-201ENST00000481627 292 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 COX6CP6-201ENST00000490840 228 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC026782.1-201ENST00000512952 449 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RNU6-408P-201ENST00000515910 100 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RNU6-1096P-201ENST00000517089 102 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC104465.1-201ENST00000611365 139 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AL357075.2-201ENST00000614906 189 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC100810.6-201ENST00000638068 285 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RNU6-593P-201ENST00000364716 112 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 Y_RNA.436-201ENST00000384097 102 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 Z83846.1-201ENST00000446798 265 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 U8.22-201ENST00000459141 133 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 snoU13.19-201ENST00000459148 104 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 RNU6-1337P-201ENST00000516525 95 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 MIR4764-201ENST00000580680 88 ntBASIC0.35□□□□□ -2.35
COL4A2P08572 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.35□□□□□ -2.35
COL4A2P08572 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
COL4A2P08572 MIR103A2-201ENST00000362154 78 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 SNORA25.3-201ENST00000363205 127 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RNU6-1059P-201ENST00000363752 98 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RNU6-324P-201ENST00000363957 106 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RNU6-831P-201ENST00000384548 107 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 Y_RNA.559-201ENST00000384686 107 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 MIR605-201ENST00000385078 83 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RNU1-119P-201ENST00000391122 165 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 SNORA75.2-201ENST00000391138 150 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 SNORA75.3-201ENST00000391231 150 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 MIR1185-1-201ENST00000408598 86 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 SNORD12B-201ENST00000410433 91 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RPS26P5-201ENST00000418544 335 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 AL157398.1-201ENST00000452981 186 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 ELOCP24-201ENST00000456370 334 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RPS29P25-201ENST00000481709 171 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 AC022616.4-201ENST00000522985 181 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 MIR4790-201ENST00000577799 79 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 MIR4802-201ENST00000581881 80 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 AL353765.1-201ENST00000605514 183 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 AC048344.4-201ENST00000619744 527 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
COL4A2P08572 RNU6-1301P-201ENST00000362724 104 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNA5SP368-201ENST00000364298 116 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-99P-201ENST00000364721 107 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-1264P-201ENST00000383891 107 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-318P-201ENST00000384283 103 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR452-201ENST00000385020 85 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 SNORA69.1-201ENST00000390904 137 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A2P08572 U8.19-201ENST00000459095 133 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR2053-201ENST00000459295 91 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 SNORA40.9-201ENST00000515895 93 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-758P-201ENST00000516292 89 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU7-43P-201ENST00000516554 64 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 SNORA18.7-201ENST00000516910 131 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 AC120024.3-201ENST00000603167 156 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 AC104695.3-201ENST00000604052 296 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL4A2P08572 snoU2-30.1-201ENST00000365012 70 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 Y_RNA.473-201ENST00000384333 102 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 MIR873-201ENST00000401120 77 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 Y_RNA.594-201ENST00000410373 140 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 Y_RNA.621-201ENST00000411065 96 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.33□□□□□ -2.36
COL4A2P08572 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A2P08572 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A2P08572 CYCTP-201ENST00000504253 315 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 SNORD111.1-201ENST00000516421 86 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-1110P-201ENST00000516462 101 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-307P-201ENST00000516743 106 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 SNORA74.3-201ENST00000517108 154 ntBASIC0.33□□□□□ -2.36
COL4A2P08572 RNU6-264P-201ENST00000517134 104 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms