Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 Y_RNA.505-201ENST00000384489 102 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 RNU6-1105P-201ENST00000384774 107 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.605-201ENST00000410577 105 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 AL390729.2-201ENST00000416137 156 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 MLLT10P1-201ENST00000418346 262 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 RPS20P10-201ENST00000451209 253 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.653-201ENST00000459091 95 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 RPS29P1-201ENST00000465274 159 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 AC090142.3-201ENST00000519012 385 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 AC144568.1-201ENST00000520139 137 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 DEFB108E-201ENST00000524692 240 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 AP003716.2-201ENST00000528260 108 ntBASIC0.65□□□□□ -2.31
HLA-DPB1P04440 RNA5SP264-201ENST00000363115 107 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.390-201ENST00000383932 102 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 SNORD116-29-201ENST00000384516 83 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DPB1P04440 RNU7-90P-201ENST00000459216 62 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 RNU6-699P-201ENST00000517081 110 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 MIR4452-201ENST00000583004 71 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 AC113139.1-201ENST00000605049 239 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 AC108706.1-201ENST00000611053 297 ntBASIC0.64□□□□□ -2.31
HLA-DPB1P04440 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HLA-DPB1P04440 SNORD50B-201ENST00000364995 70 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.329-201ENST00000365209 107 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 RNU6-1297P-201ENST00000384415 104 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 MIR1185-1-201ENST00000408598 86 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 RPS3AP1-201ENST00000413190 320 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DPB1P04440 SNRPGP10-201ENST00000432323 225 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 PRDX4P1-201ENST00000507189 574 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 RNU6-277P-201ENST00000516272 106 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 SNORA20.3-201ENST00000516880 132 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 SNORA18.7-201ENST00000516910 131 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 AC005972.2-201ENST00000604690 348 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 AC022441.3-201ENST00000605737 136 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 AL355073.2-201ENST00000612106 557 ntBASIC0.63□□□□□ -2.31
HLA-DPB1P04440 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AC117470.1-201ENST00000381974 330 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 MIR628-201ENST00000385229 95 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 MIR100-201ENST00000385259 80 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AC138393.2-201ENST00000414742 246 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 MCFD2P1-201ENST00000417812 300 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.62□□□□□ -2.31
HLA-DPB1P04440 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.676-201ENST00000516393 96 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 SNORA74.3-201ENST00000517108 154 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AC023827.1-201ENST00000569247 97 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
HLA-DPB1P04440 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 MIR103A2-201ENST00000362154 78 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.27-201ENST00000362540 103 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 RNU6-1175P-201ENST00000365200 107 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 SNORA72-201ENST00000384339 132 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 MIR520C-201ENST00000385005 87 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 MIR136-201ENST00000385207 82 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC098614.3-201ENST00000438957 440 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 RBMX2P4-201ENST00000441256 376 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC117454.1-201ENST00000491120 168 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 RN7SKP164-201ENST00000516138 266 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC022616.4-201ENST00000522985 181 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC131055.1-201ENST00000584626 316 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.61□□□□□ -2.31
HLA-DPB1P04440 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC025253.1-201ENST00000613623 543 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 AC084781.2-201ENST00000615568 161 ntBASIC0.61□□□□□ -2.31
HLA-DPB1P04440 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNU6-1084P-201ENST00000362498 107 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNU6-490P-201ENST00000362985 107 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 SNORD81.1-201ENST00000363064 77 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.259-201ENST00000364619 101 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNU6-1040P-201ENST00000383974 107 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 Y_RNA.570-201ENST00000384750 101 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 MIR499A-201ENST00000384903 122 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNY4P36-201ENST00000391116 96 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 AL590004.1-201ENST00000405321 300 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNU6-855P-201ENST00000410395 104 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNU2-64P-201ENST00000411315 191 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RNU6-911P-201ENST00000516523 104 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RN7SKP295-201ENST00000517264 153 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 AC006600.1-201ENST00000572529 153 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 MIR4764-201ENST00000580680 88 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 RBM11P1-201ENST00000604951 799 ntBASIC0.6□□□□□ -2.31
HLA-DPB1P04440 SEPT14P17-201ENST00000617978 177 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms