Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MIR516B2-201ENST00000385190 85 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 AL031003.1-201ENST00000404229 172 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 RNU2-54P-201ENST00000410299 190 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 FCF1P4-201ENST00000448326 183 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 RNU6-264P-201ENST00000517134 104 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.72□□□□□ -2.29
MT-ND3P03897 Y_RNA.6-201ENST00000362350 114 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 Y_RNA.36-201ENST00000362602 112 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 Y_RNA.253-201ENST00000364562 112 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 MIR522-201ENST00000385071 87 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 SNORD45.4-201ENST00000516629 73 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 MTND4LP26-201ENST00000518144 282 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 AC023827.1-201ENST00000569247 97 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.71□□□□□ -2.3
MT-ND3P03897 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
MT-ND3P03897 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 RNU6-99P-201ENST00000364721 107 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 SNORD111-201ENST00000408139 94 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 MIR1185-1-201ENST00000408598 86 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 RNU2-61P-201ENST00000411069 191 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 MLLT10P1-201ENST00000418346 262 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 AC144568.1-201ENST00000520139 137 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 AC005972.2-201ENST00000604690 348 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 AC240442.1-201ENST00000616055 283 ntBASIC0.7□□□□□ -2.3
MT-ND3P03897 RNU6-961P-201ENST00000363893 105 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 SNORD89-201ENST00000390981 114 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 RNU6-131P-201ENST00000391144 107 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 Y_RNA.592-201ENST00000410274 109 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 CHEK2P4-201ENST00000450340 246 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 AC098869.1-201ENST00000481627 292 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.69□□□□□ -2.3
MT-ND3P03897 RNU7-41P-201ENST00000515917 61 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 RNU6-718P-201ENST00000516166 105 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 SNORA18.7-201ENST00000516910 131 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 RNU7-4P-201ENST00000516961 62 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 AC023934.1-201ENST00000574529 2389 ntBASIC0.69□□□□□ -2.3
MT-ND3P03897 SNORA25.3-201ENST00000363205 127 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 SNORA72-201ENST00000384339 132 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 SNORD116-4-201ENST00000384733 96 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 MIR548F1-201ENST00000408667 84 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.68□□□□□ -2.3
MT-ND3P03897 AC117454.1-201ENST00000491120 168 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 PRDX4P1-201ENST00000507189 574 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 AC005176.2-201ENST00000596933 147 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 AC007742.2-201ENST00000618226 398 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
MT-ND3P03897 RNU6-324P-201ENST00000363957 106 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 Y_RNA.393-201ENST00000383936 102 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 RNU6-1297P-201ENST00000384415 104 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 RNU6-1067P-201ENST00000384752 107 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 MIR7-2-201ENST00000384970 110 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 RN7SKP164-201ENST00000516138 266 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 AC060780.3-201ENST00000589464 80 ntBASIC0.67□□□□□ -2.3
MT-ND3P03897 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.67□□□□□ -2.3
MT-ND3P03897 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
MT-ND3P03897 Y_RNA.318-201ENST00000365131 97 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 RNY3P4-201ENST00000384428 101 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.66□□□□□ -2.3
MT-ND3P03897 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 RNU6-1156P-201ENST00000410365 100 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 RNU6-710P-201ENST00000410424 105 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 MTND1P4-201ENST00000435196 415 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 RNU6-1132P-201ENST00000459214 107 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 SNORD123-201ENST00000459473 70 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 7SK.10-201ENST00000621414 298 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 AL669831.3-213ENST00000636676 183 ntBASIC0.66□□□□□ -2.3
MT-ND3P03897 Y_RNA.101-201ENST00000363154 102 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 Y_RNA.370-201ENST00000365589 108 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
MT-ND3P03897 RNU6-926P-201ENST00000384075 107 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 SNORD78.2-201ENST00000391076 69 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 AC011352.1-201ENST00000512300 793 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.65□□□□□ -2.31
MT-ND3P03897 SNORA25.10-201ENST00000515926 124 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 RNU6-358P-201ENST00000516564 75 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 AC093027.1-201ENST00000546698 429 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 RN7SL793P-201ENST00000583259 296 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 AC087588.2-201ENST00000617667 426 ntBASIC0.65□□□□□ -2.31
MT-ND3P03897 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
MT-ND3P03897 Y_RNA.230-201ENST00000364348 109 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 SNORD113.3-201ENST00000364630 78 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 AL589823.1-201ENST00000429577 183 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 SNRPGP10-201ENST00000432323 225 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.64□□□□□ -2.31
MT-ND3P03897 Y_RNA.635-201ENST00000459041 101 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 RNU6-155P-201ENST00000516347 100 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 RNU7-30P-201ENST00000516835 62 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 AC036111.3-201ENST00000526389 112 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
MT-ND3P03897 AC055872.1-201ENST00000570978 278 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms