Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNA5SP252-201ENST00000391131 119 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 AL031003.1-201ENST00000404229 172 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU6-855P-201ENST00000410395 104 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNA5SP504-201ENST00000410676 117 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 AC006461.1-201ENST00000412637 326 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 PTGES3P4-201ENST00000426243 356 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 SUMO1P4-201ENST00000429430 302 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.8□□□□□ -2.12
COL2A1P02458 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.8□□□□□ -2.12
COL2A1P02458 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL2A1P02458 AC010889.1-201ENST00000566193 2666 ntBASIC1.8□□□□□ -2.12
COL2A1P02458 RNU1-62P-201ENST00000362599 164 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 Y_RNA.81-201ENST00000362997 102 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 SNORD114-19-201ENST00000363072 75 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 RNU6-312P-201ENST00000364629 107 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 Y_RNA.341-201ENST00000365341 102 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 RNU4-17P-201ENST00000365598 141 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 RNU6-1336P-201ENST00000383886 109 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 MIR147B-201ENST00000390185 80 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 SNORA26.3-201ENST00000391119 136 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AIMP1P2-201ENST00000425294 312 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AL714022.1-201ENST00000439897 151 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 RPL30P14-201ENST00000482744 348 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC117454.1-201ENST00000491120 168 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 RNU6-313P-201ENST00000516317 112 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC136628.3-201ENST00000521868 290 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC009127.3-201ENST00000570531 403 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 MIR4744-201ENST00000581563 82 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.79□□□□□ -2.12
COL2A1P02458 AL391813.1-201ENST00000603098 260 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC013791.1-201ENST00000616619 62 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 AC095038.3-201ENST00000634439 195 ntBASIC1.79□□□□□ -2.12
COL2A1P02458 Y_RNA.36-201ENST00000362602 112 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 Y_RNA.435-201ENST00000384095 112 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 RNU6-1168P-201ENST00000390831 104 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 RNU6-578P-201ENST00000390980 103 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 RNU6-381P-201ENST00000391259 108 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 MTND4LP9-201ENST00000427694 174 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 HSPE1P21-201ENST00000438283 308 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 AL121914.1-201ENST00000450188 156 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 RNU7-141P-201ENST00000459304 62 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 AC100767.1-201ENST00000528178 123 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 EIF4A1P12-201ENST00000551910 141 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.78□□□□□ -2.12
COL2A1P02458 AC015720.1-201ENST00000565251 277 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 AC005562.2-201ENST00000618264 111 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 MTND1P7-201ENST00000632801 297 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 U6.115-201ENST00000636045 103 ntBASIC1.78□□□□□ -2.12
COL2A1P02458 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL2A1P02458 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.13
COL2A1P02458 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.13
COL2A1P02458 AC010332.2-201ENST00000613083 1904 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 Y_RNA.71-201ENST00000362892 104 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 Y_RNA.75-201ENST00000362927 97 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 Y_RNA.124-201ENST00000363339 93 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 U3.9-201ENST00000363823 204 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 SNORD115-30-201ENST00000364117 82 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 U8.7-201ENST00000364940 136 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 RNU6-245P-201ENST00000384020 107 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 MIR626-201ENST00000385032 94 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 RNU6-239P-201ENST00000390990 99 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 RNU6-460P-201ENST00000391158 108 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 MIR320B2-201ENST00000408479 138 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.77□□□□□ -2.13
COL2A1P02458 RPL36AP48-201ENST00000485521 314 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
COL2A1P02458 RNU6-63P-201ENST00000516690 95 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.77□□□□□ -2.13
COL2A1P02458 CYCSP23-201ENST00000519781 313 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 AC115990.1-201ENST00000526957 301 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 MIR548X2-201ENST00000579776 100 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 MIR3684-201ENST00000579779 74 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 MIR3136-201ENST00000583498 78 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 TCL6_2.1-201ENST00000615162 119 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 AC090517.3-201ENST00000625170 141 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 ICE2P2-201ENST00000483823 2787 ntBASIC1.77□□□□□ -2.13
COL2A1P02458 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL2A1P02458 Y_RNA.205-201ENST00000364128 113 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 Y_RNA.218-201ENST00000364218 104 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 Y_RNA.287-201ENST00000364853 94 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 RNU6-275P-201ENST00000364910 107 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 Y_RNA.294-201ENST00000364916 102 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 SNORD37.2-201ENST00000391075 66 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 MIR1278-201ENST00000408753 81 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 RNU6-588P-201ENST00000410281 105 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 RNA5SP201-201ENST00000410316 124 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 RNA5SP38-201ENST00000410750 119 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 Y_RNA.622-201ENST00000411091 108 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 RPS26P42-201ENST00000413485 326 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 AC016717.1-201ENST00000448918 286 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 RNU6-1098P-201ENST00000516772 96 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.76□□□□□ -2.13
COL2A1P02458 SNORD11B-201ENST00000607707 90 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.76□□□□□ -2.13
COL2A1P02458 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 AC068647.2-201ENST00000637380 353 ntBASIC1.76□□□□□ -2.13
COL2A1P02458 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms