Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092447.3-201ENST00000426027 686 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL1A1P02452 RPL30P10-201ENST00000488148 337 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 SCARNA8-201ENST00000515924 131 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 SNORA40.12-201ENST00000516329 111 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 AC134698.4-201ENST00000523451 826 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 MIR3915-201ENST00000578518 97 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 MIR548AO-201ENST00000579992 96 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 AC092447.9-201ENST00000603395 144 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 AL591926.4-201ENST00000616895 298 ntBASIC-0.1□□□□□ -2.43
COL1A1P02452 SNORA36.1-201ENST00000363424 132 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 SNORD113-7-201ENST00000363762 77 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 RNU6-553P-201ENST00000364047 96 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 U8.5-201ENST00000364528 136 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 MT-TH-201ENST00000387441 69 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 RNU6-127P-201ENST00000390897 107 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 RNU2-59P-201ENST00000410482 191 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 AL358934.1-201ENST00000432346 324 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 MTND1P27-201ENST00000451117 902 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 SUMO1P2-201ENST00000452524 304 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL1A1P02452 ACA59.1-201ENST00000515966 143 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 RNU7-129P-201ENST00000516128 62 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 RN7SKP287-201ENST00000516546 266 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 MIR5696-201ENST00000578474 85 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 MIR4752-201ENST00000579672 72 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 AC008608.1-201ENST00000603910 127 ntBASIC-0.11□□□□□ -2.43
COL1A1P02452 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.11□□□□□ -2.43
COL1A1P02452 RNU4-21P-201ENST00000362802 126 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNA5SP128-201ENST00000365305 116 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNU6-128P-201ENST00000383976 107 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 SNORA32.3-201ENST00000384772 121 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 MIR570-201ENST00000384917 97 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 MIR644A-201ENST00000385262 94 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 MT-TN-201ENST00000387400 73 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 MIR873-201ENST00000401120 77 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 ELOCP21-201ENST00000412558 336 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 AL354751.2-201ENST00000415471 210 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 USMG5P1-201ENST00000425964 177 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNU7-187P-201ENST00000458985 68 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNU4-49P-201ENST00000516080 140 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNU6-63P-201ENST00000516690 95 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNU6-759P-201ENST00000516740 103 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNA5SP94-201ENST00000516917 108 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 IGKV1-22-201ENST00000524313 326 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 AC007751.1-201ENST00000529260 376 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 AP000753.3-201ENST00000604083 169 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 AF250324.2-201ENST00000608299 610 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 AC109347.2-201ENST00000610220 349 ntBASIC-0.12□□□□□ -2.43
COL1A1P02452 RNA5SP117-201ENST00000365294 118 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 MIR522-201ENST00000385071 87 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 MIR610-201ENST00000385139 96 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 MTCO2P33-201ENST00000402100 465 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 SNORD100-201ENST00000408573 76 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 RNU4-30P-201ENST00000410245 143 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 RNU2-54P-201ENST00000410299 190 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 MTND3P16-201ENST00000452205 344 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 U8.19-201ENST00000459095 133 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 U8.22-201ENST00000459141 133 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.13□□□□□ -2.43
COL1A1P02452 AL118558.2-201ENST00000556294 238 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.13□□□□□ -2.43
COL1A1P02452 Z94722.1-201ENST00000604328 474 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 AC011921.3-201ENST00000605540 361 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 AC020891.4-201ENST00000605745 93 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 AC092954.2-201ENST00000609103 430 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 AC092807.2-201ENST00000609367 243 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 MIR8064-201ENST00000612863 90 ntBASIC-0.13□□□□□ -2.43
COL1A1P02452 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL1A1P02452 RNU6-254P-201ENST00000363377 107 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 SNORD50B-201ENST00000364995 70 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 SNORD114-12-201ENST00000365400 75 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 SNORA8.2-201ENST00000384372 139 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 BTF3P11-201ENST00000426582 477 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 HMGN2P32-201ENST00000444648 269 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 AC116353.2-201ENST00000505332 712 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 AC074198.2-201ENST00000508153 258 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
COL1A1P02452 AC090617.3-201ENST00000573670 475 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 MIR4771-2-201ENST00000577758 74 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 MIR4771-1-201ENST00000582617 74 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 AC040904.1-201ENST00000590850 223 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 AC019193.3-201ENST00000609144 554 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 AC023510.2-201ENST00000622162 746 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 MIR1295B-201ENST00000636144 60 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 AC099654.12-201ENST00000639868 649 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 MTND5P32-201ENST00000560711 1802 ntBASIC-0.14□□□□□ -2.43
COL1A1P02452 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
COL1A1P02452 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.15□□□□□ -2.43
COL1A1P02452 RNA5SP205-201ENST00000364653 136 ntBASIC-0.15□□□□□ -2.43
COL1A1P02452 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms