Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-450P-201ENST00000364654 107 ntBASIC1.56□□□□□ -2.16
DDX58O95786 RNU6-1080P-201ENST00000383982 107 ntBASIC1.56□□□□□ -2.16
DDX58O95786 Y_RNA.551-201ENST00000384661 102 ntBASIC1.56□□□□□ -2.16
DDX58O95786 MIR660-201ENST00000385235 97 ntBASIC1.56□□□□□ -2.16
DDX58O95786 SNORA12.1-201ENST00000390873 148 ntBASIC1.56□□□□□ -2.16
DDX58O95786 RNU6-710P-201ENST00000410424 105 ntBASIC1.56□□□□□ -2.16
DDX58O95786 RPS4XP11-201ENST00000446897 772 ntBASIC1.56□□□□□ -2.16
DDX58O95786 RPS29P29-201ENST00000456396 171 ntBASIC1.56□□□□□ -2.16
DDX58O95786 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
DDX58O95786 AL512310.8-201ENST00000550183 120 ntBASIC1.56□□□□□ -2.16
DDX58O95786 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
DDX58O95786 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
DDX58O95786 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
DDX58O95786 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
DDX58O95786 Y_RNA.138-201ENST00000363462 102 ntBASIC1.55□□□□□ -2.16
DDX58O95786 U8.16-201ENST00000391279 133 ntBASIC1.55□□□□□ -2.16
DDX58O95786 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
DDX58O95786 HMGN1P7-201ENST00000491722 313 ntBASIC1.55□□□□□ -2.16
DDX58O95786 OR9P1P-201ENST00000496431 281 ntBASIC1.55□□□□□ -2.16
DDX58O95786 RNU7-12P-201ENST00000516030 62 ntBASIC1.55□□□□□ -2.16
DDX58O95786 AC011604.1-201ENST00000545978 196 ntBASIC1.55□□□□□ -2.16
DDX58O95786 CYP3A52P-201ENST00000563326 91 ntBASIC1.55□□□□□ -2.16
DDX58O95786 DEFB117-201ENST00000602356 141 ntBASIC1.55□□□□□ -2.16
DDX58O95786 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.55□□□□□ -2.16
DDX58O95786 AC091895.1-201ENST00000624494 256 ntBASIC1.55□□□□□ -2.16
DDX58O95786 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
DDX58O95786 MIR26B-201ENST00000362251 77 ntBASIC1.54□□□□□ -2.16
DDX58O95786 SNORD68-201ENST00000363214 84 ntBASIC1.54□□□□□ -2.16
DDX58O95786 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
DDX58O95786 SNORD63-201ENST00000384262 68 ntBASIC1.54□□□□□ -2.16
DDX58O95786 RPL30P13-201ENST00000418873 348 ntBASIC1.54□□□□□ -2.16
DDX58O95786 RNU6-1046P-201ENST00000516538 107 ntBASIC1.54□□□□□ -2.16
DDX58O95786 Y_RNA.721-201ENST00000517207 102 ntBASIC1.54□□□□□ -2.16
DDX58O95786 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
DDX58O95786 AC022616.4-201ENST00000522985 181 ntBASIC1.54□□□□□ -2.16
DDX58O95786 AL358944.1-201ENST00000528537 144 ntBASIC1.54□□□□□ -2.16
DDX58O95786 AC005972.2-201ENST00000604690 348 ntBASIC1.54□□□□□ -2.16
DDX58O95786 PART1_1.1-201ENST00000611761 217 ntBASIC1.54□□□□□ -2.16
DDX58O95786 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.54□□□□□ -2.16
DDX58O95786 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.54□□□□□ -2.16
DDX58O95786 SNORD81.1-201ENST00000363064 77 ntBASIC1.53□□□□□ -2.16
DDX58O95786 RNU4-41P-201ENST00000364426 143 ntBASIC1.53□□□□□ -2.16
DDX58O95786 Y_RNA.341-201ENST00000365341 102 ntBASIC1.53□□□□□ -2.16
DDX58O95786 Y_RNA.355-201ENST00000365462 98 ntBASIC1.53□□□□□ -2.16
DDX58O95786 SNORA22B-201ENST00000383876 138 ntBASIC1.53□□□□□ -2.16
DDX58O95786 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
DDX58O95786 RNU6-823P-201ENST00000391042 103 ntBASIC1.53□□□□□ -2.16
DDX58O95786 Y_RNA.645-201ENST00000391229 102 ntBASIC1.53□□□□□ -2.16
DDX58O95786 MIR548P-201ENST00000408336 84 ntBASIC1.53□□□□□ -2.16
DDX58O95786 RNU6-130P-201ENST00000411112 103 ntBASIC1.53□□□□□ -2.16
DDX58O95786 AC093850.1-201ENST00000454121 251 ntBASIC1.53□□□□□ -2.16
DDX58O95786 RPL39P38-201ENST00000467018 153 ntBASIC1.53□□□□□ -2.16
DDX58O95786 SEPT14P8-201ENST00000508026 178 ntBASIC1.53□□□□□ -2.16
DDX58O95786 Y_RNA.715-201ENST00000517082 110 ntBASIC1.53□□□□□ -2.16
DDX58O95786 MIR3145-201ENST00000580727 82 ntBASIC1.53□□□□□ -2.16
DDX58O95786 AC104695.3-201ENST00000604052 296 ntBASIC1.53□□□□□ -2.16
DDX58O95786 AC004832.4-201ENST00000608952 331 ntBASIC1.53□□□□□ -2.16
DDX58O95786 AC068647.2-201ENST00000637380 353 ntBASIC1.53□□□□□ -2.16
DDX58O95786 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.17
DDX58O95786 RNU6-199P-201ENST00000362954 107 ntBASIC1.52□□□□□ -2.17
DDX58O95786 SNORA63.7-201ENST00000365579 123 ntBASIC1.52□□□□□ -2.17
DDX58O95786 RNU6-424P-201ENST00000384367 105 ntBASIC1.52□□□□□ -2.17
DDX58O95786 RNU6-1105P-201ENST00000384774 107 ntBASIC1.52□□□□□ -2.17
DDX58O95786 MLLT10P1-201ENST00000418346 262 ntBASIC1.52□□□□□ -2.17
DDX58O95786 POLR2KP2-201ENST00000438155 177 ntBASIC1.52□□□□□ -2.17
DDX58O95786 RPS20P10-201ENST00000451209 253 ntBASIC1.52□□□□□ -2.17
DDX58O95786 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.52□□□□□ -2.17
DDX58O95786 MIR3171-201ENST00000584270 74 ntBASIC1.52□□□□□ -2.17
DDX58O95786 SNORD113-5-201ENST00000607261 78 ntBASIC1.52□□□□□ -2.17
DDX58O95786 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
DDX58O95786 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.52□□□□□ -2.17
DDX58O95786 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
DDX58O95786 Y_RNA.116-201ENST00000363292 103 ntBASIC1.51□□□□□ -2.17
DDX58O95786 Y_RNA.383-201ENST00000383855 97 ntBASIC1.51□□□□□ -2.17
DDX58O95786 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
DDX58O95786 Y_RNA.602-201ENST00000410535 92 ntBASIC1.51□□□□□ -2.17
DDX58O95786 Z98949.2-201ENST00000440996 144 ntBASIC1.51□□□□□ -2.17
DDX58O95786 RNU6-322P-201ENST00000516010 103 ntBASIC1.51□□□□□ -2.17
DDX58O95786 RNU6-922P-201ENST00000516753 99 ntBASIC1.51□□□□□ -2.17
DDX58O95786 RNA5SP102-201ENST00000516865 106 ntBASIC1.51□□□□□ -2.17
DDX58O95786 MIR3664-201ENST00000579074 99 ntBASIC1.51□□□□□ -2.17
DDX58O95786 MIR6504-201ENST00000613520 61 ntBASIC1.51□□□□□ -2.17
DDX58O95786 MIR376A1-201ENST00000616574 68 ntBASIC1.51□□□□□ -2.17
DDX58O95786 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
DDX58O95786 Y_RNA.122-201ENST00000363331 96 ntBASIC1.5□□□□□ -2.17
DDX58O95786 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
DDX58O95786 RNU6-163P-201ENST00000384396 106 ntBASIC1.5□□□□□ -2.17
DDX58O95786 MIR518E-201ENST00000385252 88 ntBASIC1.5□□□□□ -2.17
DDX58O95786 AC092991.1-201ENST00000477176 376 ntBASIC1.5□□□□□ -2.17
DDX58O95786 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.5□□□□□ -2.17
DDX58O95786 RNU6-897P-201ENST00000517135 105 ntBASIC1.5□□□□□ -2.17
DDX58O95786 AC019288.1-201ENST00000557918 224 ntBASIC1.5□□□□□ -2.17
DDX58O95786 AC136932.1-201ENST00000574771 208 ntBASIC1.5□□□□□ -2.17
DDX58O95786 AL513534.2-201ENST00000603836 250 ntBASIC1.5□□□□□ -2.17
DDX58O95786 SNORD113-8-201ENST00000363497 74 ntBASIC1.49□□□□□ -2.17
DDX58O95786 Y_RNA.183-201ENST00000363882 113 ntBASIC1.49□□□□□ -2.17
DDX58O95786 Y_RNA.216-201ENST00000364205 93 ntBASIC1.49□□□□□ -2.17
DDX58O95786 SNORD26-201ENST00000384147 75 ntBASIC1.49□□□□□ -2.17
DDX58O95786 AL590004.1-201ENST00000405321 300 ntBASIC1.49□□□□□ -2.17
DDX58O95786 MIR1252-201ENST00000408861 65 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms