Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
UPK3AO75631 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 Y_RNA.166-201ENST00000363730 102 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 MIR1298-201ENST00000408783 112 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 MIR548J-201ENST00000408833 112 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 RNU6-155P-201ENST00000516347 100 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 MTND4LP26-201ENST00000518144 282 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 AC144568.1-201ENST00000520139 137 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 AC011476.5-201ENST00000615594 130 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 U6atac.1-201ENST00000616025 117 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
UPK3AO75631 Y_RNA.172-201ENST00000363765 102 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 U8.5-201ENST00000364528 136 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 SNORD81.2-201ENST00000365153 76 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 Y_RNA.330-201ENST00000365230 109 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 RNU6-20P-201ENST00000384106 107 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 RNY3P4-201ENST00000384428 101 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 MT-TL1-201ENST00000386347 75 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 SNORD78.2-201ENST00000391076 69 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 MRPS18CP6-201ENST00000423587 223 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 AC022709.1-201ENST00000615967 87 ntBASIC0.69□□□□□ -2.3
UPK3AO75631 RNU6-626P-201ENST00000363354 107 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 Y_RNA.248-201ENST00000364501 109 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 Y_RNA.253-201ENST00000364562 112 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 Y_RNA.314-201ENST00000365114 102 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 Y_RNA.466-201ENST00000384294 113 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 MIR628-201ENST00000385229 95 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 CHEK2P4-201ENST00000450340 246 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 PRDX4P1-201ENST00000507189 574 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 SNORA25.10-201ENST00000515926 124 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 RNU6-470P-201ENST00000515954 104 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3AO75631 MIR4762-201ENST00000585261 75 ntBASIC0.68□□□□□ -2.3
UPK3AO75631 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 RNU6-1084P-201ENST00000362498 107 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 SNORA25.3-201ENST00000363205 127 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 Y_RNA.112-201ENST00000363250 102 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 Y_RNA.446-201ENST00000384178 104 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 MIR136-201ENST00000385207 82 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 RNU2-61P-201ENST00000411069 191 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 RNU6-1199P-201ENST00000411249 104 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 AL390729.2-201ENST00000416137 156 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 MTCO3P10-201ENST00000455912 772 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 RNU6-559P-201ENST00000516151 98 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 DEFB108E-201ENST00000524692 240 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.67□□□□□ -2.3
UPK3AO75631 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 MIR4659A-201ENST00000580269 81 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
UPK3AO75631 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 MIR598-201ENST00000384868 97 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 MIR522-201ENST00000385071 87 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 Y_RNA.653-201ENST00000459091 95 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 RNU6-436P-201ENST00000516171 114 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 RNU6-966P-201ENST00000516479 104 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 RNU6-1012P-201ENST00000516606 109 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 SNORD45.4-201ENST00000516629 73 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 SNORA74.3-201ENST00000517108 154 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 AC022616.4-201ENST00000522985 181 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 AC104465.1-201ENST00000611365 139 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 U2.1-201ENST00000618978 145 ntBASIC0.66□□□□□ -2.3
UPK3AO75631 Y_RNA.354-201ENST00000365448 111 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 RNU6-1297P-201ENST00000384415 104 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 Y_RNA.599-201ENST00000410489 109 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 AC096644.2-201ENST00000429278 159 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 MTND1P2-201ENST00000430604 821 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK3AO75631 AC005972.2-201ENST00000604690 348 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 AC092794.1-201ENST00000612734 582 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 AC133104.2-201ENST00000615272 193 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 AC022306.2-201ENST00000617563 647 ntBASIC0.65□□□□□ -2.31
UPK3AO75631 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3AO75631 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
UPK3AO75631 snoU2-30.1-201ENST00000365012 70 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 RNU6-708P-201ENST00000384217 107 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 RNU6-131P-201ENST00000391144 107 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 Y_RNA.619-201ENST00000410951 90 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK3AO75631 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 AC113139.1-201ENST00000605049 239 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms