Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 AC010205.1-201ENST00000616668 449 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 uc_338.22-201ENST00000622722 187 ntBASIC1.2□□□□□ -2.22
CSDE1O75534 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CSDE1O75534 RNU6-199P-201ENST00000362954 107 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 Y_RNA.112-201ENST00000363250 102 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 RNU6-1080P-201ENST00000383982 107 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 RNU6-21P-201ENST00000384710 107 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 RNU6-855P-201ENST00000410395 104 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 MCFD2P1-201ENST00000417812 300 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.19□□□□□ -2.22
CSDE1O75534 RPS4XP11-201ENST00000446897 772 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 RNU6-922P-201ENST00000516753 99 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 Y_RNA.713-201ENST00000517013 96 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 AL358944.1-201ENST00000528537 144 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 AC090574.1-201ENST00000623186 233 ntBASIC1.19□□□□□ -2.22
CSDE1O75534 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CSDE1O75534 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CSDE1O75534 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 Y_RNA.116-201ENST00000363292 103 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 Y_RNA.172-201ENST00000363765 102 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 RNU4-41P-201ENST00000364426 143 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 RNU6-937P-201ENST00000384325 106 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 Y_RNA.509-201ENST00000384506 99 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CSDE1O75534 RNU6-710P-201ENST00000410424 105 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
CSDE1O75534 AC093850.1-201ENST00000454121 251 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 RPL39P38-201ENST00000467018 153 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CSDE1O75534 AC011604.1-201ENST00000545978 196 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 AC004832.4-201ENST00000608952 331 ntBASIC1.18□□□□□ -2.22
CSDE1O75534 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.18□□□□□ -2.22
CSDE1O75534 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSDE1O75534 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 Y_RNA.143-201ENST00000363520 106 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 Y_RNA.269-201ENST00000364685 89 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 Y_RNA.460-201ENST00000384255 102 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 Y_RNA.462-201ENST00000384268 102 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 RNU4-30P-201ENST00000410245 143 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 AC024067.1-201ENST00000426199 223 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 RNU6-475P-201ENST00000516073 104 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 MIR4423-201ENST00000580922 80 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 DEFB117-201ENST00000602356 141 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 AL160413.1-201ENST00000622780 310 ntBASIC1.17□□□□□ -2.22
CSDE1O75534 SNORD42.2-201ENST00000365570 69 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 Y_RNA.394-201ENST00000383942 103 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 Y_RNA.395-201ENST00000383945 109 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 RNU6-163P-201ENST00000384396 106 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 Y_RNA.508-201ENST00000384502 114 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 RNU6-1105P-201ENST00000384774 107 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MIR1302-11-201ENST00000408051 138 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MIR1302-9-201ENST00000408365 138 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MIR1302-10-201ENST00000408734 138 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MTND4P19-201ENST00000446659 478 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 RNU6-322P-201ENST00000516010 103 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 SNORA4-201ENST00000584302 138 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 C8orf59P2-201ENST00000603441 271 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 AC005972.2-201ENST00000604690 348 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MIR1302-2-201ENST00000607096 138 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 MIR7111-201ENST00000619751 72 ntBASIC1.16□□□□□ -2.22
CSDE1O75534 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.16□□□□□ -2.22
CSDE1O75534 Y_RNA.31-201ENST00000362574 102 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 Y_RNA.341-201ENST00000365341 102 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 Y_RNA.551-201ENST00000384661 102 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 AL451046.2-201ENST00000403074 277 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.15□□□□□ -2.23
CSDE1O75534 PIGPP3-201ENST00000425307 415 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 AC104332.1-201ENST00000440471 797 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 Z98949.2-201ENST00000440996 144 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 RPS20P10-201ENST00000451209 253 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 Y_RNA.639-201ENST00000458981 102 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 SNORA25.10-201ENST00000515926 124 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 RNU6-1116P-201ENST00000517269 99 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 AC022616.4-201ENST00000522985 181 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 AC124312.5-201ENST00000604451 268 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 AC068647.2-201ENST00000637380 353 ntBASIC1.15□□□□□ -2.23
CSDE1O75534 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.15□□□□□ -2.23
CSDE1O75534 MIR891A-201ENST00000401237 79 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 MLLT10P1-201ENST00000418346 262 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 CYCTP-201ENST00000504253 315 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 RNU6-397P-201ENST00000516226 104 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 MIR3145-201ENST00000580727 82 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 FAM106DP-201ENST00000586416 501 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 AC120024.3-201ENST00000603167 156 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 AL513534.2-201ENST00000603836 250 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
CSDE1O75534 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.14□□□□□ -2.23
CSDE1O75534 AL591926.4-201ENST00000616895 298 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms