Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.293-201ENST00000364908 93 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 Y_RNA.338-201ENST00000365320 114 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RNU6-209P-201ENST00000384118 107 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 Y_RNA.571-201ENST00000384753 98 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RPS15AP28-201ENST00000435088 386 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RNU6-437P-201ENST00000459408 95 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RN7SKP164-201ENST00000516138 266 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 AC022559.1-201ENST00000520905 205 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 AL358944.1-201ENST00000528537 144 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 MIR4724-201ENST00000579485 89 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 AC018630.2-201ENST00000534866 2403 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS4BO75351 RNU6-136P-201ENST00000384663 107 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 MIR616-201ENST00000385293 97 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 RNU6-341P-201ENST00000516973 96 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 RNU6-1096P-201ENST00000517089 102 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 AL021707.8-201ENST00000609428 183 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 MIR6079-201ENST00000635807 62 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS4BO75351 ZNF720P1-201ENST00000562403 1939 ntBASIC2.22□□□□□ -2.05
VPS4BO75351 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS4BO75351 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS4BO75351 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VPS4BO75351 Y_RNA.24-201ENST00000362508 103 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 Y_RNA.150-201ENST00000363562 102 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 RNU6-103P-201ENST00000363686 107 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 RNU6-969P-201ENST00000383900 105 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 Y_RNA.572-201ENST00000384757 98 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 RN7SKP101-201ENST00000411376 320 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VPS4BO75351 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS4BO75351 AC091021.1-201ENST00000468051 388 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 RPL23AP54-201ENST00000495129 419 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 AL163195.1-201ENST00000496941 348 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 SCARNA8-201ENST00000515924 131 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 RNU6-861P-201ENST00000516745 106 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 AC011604.1-201ENST00000545978 196 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 AL929325.1-201ENST00000603096 117 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 AL391903.3-201ENST00000612158 163 ntBASIC2.21□□□□□ -2.06
VPS4BO75351 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS4BO75351 Y_RNA.75-201ENST00000362927 97 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 Y_RNA.270-201ENST00000364693 104 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 SNORA8-201ENST00000384574 139 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 MIR562-201ENST00000384894 95 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 MIR597-201ENST00000384968 97 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 RNU11-3P-201ENST00000391111 133 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 SNORA11.4-201ENST00000408823 129 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 RPS27P1-201ENST00000450552 247 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 RNU7-94P-201ENST00000459576 63 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 RNU6-1219P-201ENST00000516143 112 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 AC012640.5-201ENST00000623897 319 ntBASIC2.2□□□□□ -2.06
VPS4BO75351 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS4BO75351 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS4BO75351 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 Y_RNA.164-201ENST00000363709 102 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 Y_RNA.203-201ENST00000364106 102 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 Y_RNA.229-201ENST00000364347 113 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 RNU6-1019P-201ENST00000364424 107 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 Y_RNA.464-201ENST00000384282 110 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VPS4BO75351 SNORA48.1-201ENST00000390879 135 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 RNA5SP496-201ENST00000391240 109 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 RNU6-383P-201ENST00000410864 94 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VPS4BO75351 AC245047.4-201ENST00000433189 144 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 MTND2P29-201ENST00000438595 412 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 RNU6-1212P-201ENST00000517023 104 ntBASIC2.19□□□□□ -2.06
VPS4BO75351 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
VPS4BO75351 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
VPS4BO75351 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VPS4BO75351 MIR367-201ENST00000362299 68 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 Y_RNA.441-201ENST00000384123 112 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 RNU4-70P-201ENST00000384579 139 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS4BO75351 MRPS18CP4-201ENST00000535821 231 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 MIR4744-201ENST00000581563 82 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 AC022217.4-201ENST00000604389 163 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 RNU2-4P-201ENST00000606190 192 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
VPS4BO75351 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS4BO75351 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS4BO75351 Y_RNA.140-201ENST00000363474 103 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 RNU6-312P-201ENST00000364629 107 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 RNU6-1062P-201ENST00000383908 107 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 Y_RNA.412-201ENST00000384001 104 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 RNY3P5-201ENST00000384127 102 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 SNORD23.1-201ENST00000408212 104 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 Y_RNA.662-201ENST00000516028 97 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms