Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC130289.1-201ENST00000577321 73 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC005972.2-201ENST00000604690 348 ntBASIC1.67□□□□□ -2.14
PRKNO60260 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
PRKNO60260 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PRKNO60260 Y_RNA.76-201ENST00000362931 109 ntBASIC1.66□□□□□ -2.14
PRKNO60260 RNU6-1019P-201ENST00000364424 107 ntBASIC1.66□□□□□ -2.14
PRKNO60260 RNU6-200P-201ENST00000364743 107 ntBASIC1.66□□□□□ -2.14
PRKNO60260 U8.7-201ENST00000364940 136 ntBASIC1.66□□□□□ -2.14
PRKNO60260 RNU6-211P-201ENST00000384047 107 ntBASIC1.66□□□□□ -2.14
PRKNO60260 AL158823.1-201ENST00000418441 478 ntBASIC1.66□□□□□ -2.14
PRKNO60260 AC245047.4-201ENST00000433189 144 ntBASIC1.66□□□□□ -2.14
PRKNO60260 MTND2P29-201ENST00000438595 412 ntBASIC1.66□□□□□ -2.14
PRKNO60260 Z98949.2-201ENST00000440996 144 ntBASIC1.66□□□□□ -2.14
PRKNO60260 RNU7-141P-201ENST00000459304 62 ntBASIC1.66□□□□□ -2.14
PRKNO60260 RPS26P45-201ENST00000471748 340 ntBASIC1.66□□□□□ -2.14
PRKNO60260 AC117454.1-201ENST00000491120 168 ntBASIC1.66□□□□□ -2.14
PRKNO60260 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.66□□□□□ -2.14
PRKNO60260 RNU6-1291P-201ENST00000516591 104 ntBASIC1.66□□□□□ -2.14
PRKNO60260 RNA5SP364-201ENST00000516938 78 ntBASIC1.66□□□□□ -2.14
PRKNO60260 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
PRKNO60260 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.66□□□□□ -2.14
PRKNO60260 AL008718.3-201ENST00000610217 321 ntBASIC1.66□□□□□ -2.14
PRKNO60260 AC018630.2-201ENST00000534866 2403 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.82-201ENST00000363000 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.92-201ENST00000363043 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.122-201ENST00000363331 96 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.235-201ENST00000364412 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.267-201ENST00000364679 109 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.306-201ENST00000365015 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.312-201ENST00000365089 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.322-201ENST00000365151 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PRKNO60260 RNA5SP109-201ENST00000391010 116 ntBASIC1.65□□□□□ -2.15
PRKNO60260 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
PRKNO60260 AL606517.2-201ENST00000442855 241 ntBASIC1.65□□□□□ -2.15
PRKNO60260 RPS4XP11-201ENST00000446897 772 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.650-201ENST00000459002 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 RPL36AP21-201ENST00000490372 323 ntBASIC1.65□□□□□ -2.15
PRKNO60260 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.65□□□□□ -2.15
PRKNO60260 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
PRKNO60260 SNORD116-28-201ENST00000516123 91 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.676-201ENST00000516393 96 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.777-201ENST00000516982 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 RNU6-1096P-201ENST00000517089 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.65□□□□□ -2.15
PRKNO60260 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.65□□□□□ -2.15
PRKNO60260 MIR4282-201ENST00000583613 67 ntBASIC1.65□□□□□ -2.15
PRKNO60260 POLR3GP1-201ENST00000594073 261 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.771-201ENST00000598668 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
PRKNO60260 AL442067.1-201ENST00000613261 223 ntBASIC1.65□□□□□ -2.15
PRKNO60260 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
PRKNO60260 AL078604.3-201ENST00000615580 211 ntBASIC1.65□□□□□ -2.15
PRKNO60260 MIR548AY-201ENST00000617669 107 ntBASIC1.65□□□□□ -2.15
PRKNO60260 U1.36-201ENST00000620684 176 ntBASIC1.65□□□□□ -2.15
PRKNO60260 Y_RNA.789-201ENST00000622480 102 ntBASIC1.65□□□□□ -2.15
PRKNO60260 MIR6079-201ENST00000635807 62 ntBASIC1.65□□□□□ -2.15
PRKNO60260 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PRKNO60260 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
PRKNO60260 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
PRKNO60260 RNU6-899P-201ENST00000363947 107 ntBASIC1.64□□□□□ -2.15
PRKNO60260 Y_RNA.274-201ENST00000364714 101 ntBASIC1.64□□□□□ -2.15
PRKNO60260 MIR1298-201ENST00000408783 112 ntBASIC1.64□□□□□ -2.15
PRKNO60260 Y_RNA.621-201ENST00000411065 96 ntBASIC1.64□□□□□ -2.15
PRKNO60260 RNU2-64P-201ENST00000411315 191 ntBASIC1.64□□□□□ -2.15
PRKNO60260 AC233266.1-201ENST00000454518 96 ntBASIC1.64□□□□□ -2.15
PRKNO60260 SNORD2.1-201ENST00000458762 69 ntBASIC1.64□□□□□ -2.15
PRKNO60260 RNA5SP57-201ENST00000459463 123 ntBASIC1.64□□□□□ -2.15
PRKNO60260 RNU7-115P-201ENST00000516433 55 ntBASIC1.64□□□□□ -2.15
PRKNO60260 AC024405.2-202ENST00000532731 184 ntBASIC1.64□□□□□ -2.15
PRKNO60260 SUB1P4-201ENST00000566062 339 ntBASIC1.64□□□□□ -2.15
PRKNO60260 MIR3935-201ENST00000583472 104 ntBASIC1.64□□□□□ -2.15
PRKNO60260 AC022217.4-201ENST00000604389 163 ntBASIC1.64□□□□□ -2.15
PRKNO60260 AC011921.3-201ENST00000605540 361 ntBASIC1.64□□□□□ -2.15
PRKNO60260 AC242852.1-201ENST00000612151 96 ntBASIC1.64□□□□□ -2.15
PRKNO60260 uc_338.20-201ENST00000621563 178 ntBASIC1.64□□□□□ -2.15
PRKNO60260 AC244015.1-201ENST00000622301 99 ntBASIC1.64□□□□□ -2.15
PRKNO60260 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PRKNO60260 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
PRKNO60260 Y_RNA.200-201ENST00000364018 102 ntBASIC1.63□□□□□ -2.15
PRKNO60260 RNU6-1323P-201ENST00000384025 107 ntBASIC1.63□□□□□ -2.15
PRKNO60260 MIR520G-201ENST00000385064 90 ntBASIC1.63□□□□□ -2.15
PRKNO60260 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PRKNO60260 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
PRKNO60260 RNU2-7P-201ENST00000410794 178 ntBASIC1.63□□□□□ -2.15
PRKNO60260 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
PRKNO60260 RNU7-94P-201ENST00000459576 63 ntBASIC1.63□□□□□ -2.15
PRKNO60260 RPL23AP54-201ENST00000495129 419 ntBASIC1.63□□□□□ -2.15
PRKNO60260 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
PRKNO60260 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
PRKNO60260 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
PRKNO60260 MIR5692C2-201ENST00000577959 77 ntBASIC1.63□□□□□ -2.15
PRKNO60260 AC091178.2-201ENST00000584401 117 ntBASIC1.63□□□□□ -2.15
PRKNO60260 AC013791.1-201ENST00000616619 62 ntBASIC1.63□□□□□ -2.15
PRKNO60260 AC068700.1-201ENST00000565862 3754 ntBASIC1.63□□□□□ -2.15
PRKNO60260 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PRKNO60260 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PRKNO60260 MIR411-201ENST00000362239 96 ntBASIC1.62□□□□□ -2.15
PRKNO60260 RNU6-112P-201ENST00000363599 104 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms