Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-1011P-201ENST00000384668 107 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 RNU6-1105P-201ENST00000384774 107 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
XRCC3O43542 SNORA26.9-201ENST00000391322 122 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 AL731563.1-201ENST00000442202 214 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 RNA5SP182-201ENST00000516064 82 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.41□□□□□ -2.18
XRCC3O43542 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.41□□□□□ -2.18
XRCC3O43542 MIR4762-201ENST00000585261 75 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 AC006504.6-201ENST00000590142 199 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 AP000942.3-201ENST00000603702 160 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 Y_RNA.812-201ENST00000610788 101 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 MIR6845-201ENST00000613182 61 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 Y_RNA.784-201ENST00000613803 101 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 Y_RNA.787-201ENST00000616522 101 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 AL591926.4-201ENST00000616895 298 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 Y_RNA.780-201ENST00000617336 101 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 Y_RNA.801-201ENST00000619005 101 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
XRCC3O43542 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
XRCC3O43542 Y_RNA.26-201ENST00000362539 101 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 Y_RNA.64-201ENST00000362845 102 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 RNU6-801P-201ENST00000364087 105 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 U8.5-201ENST00000364528 136 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 U8.13-201ENST00000390842 128 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AC113618.1-201ENST00000416747 285 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 RPL21P38-201ENST00000418090 167 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.4□□□□□ -2.19
XRCC3O43542 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AC104332.1-201ENST00000440471 797 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 RNU7-115P-201ENST00000516433 55 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AP003733.2-201ENST00000529409 171 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AC024405.2-202ENST00000532731 184 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AC110588.1-201ENST00000559699 137 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 MIR3937-201ENST00000580135 106 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 AL365434.2-201ENST00000607979 234 ntBASIC1.4□□□□□ -2.19
XRCC3O43542 Y_RNA.253-201ENST00000364562 112 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 U8.7-201ENST00000364940 136 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 RNU6-1065P-201ENST00000384513 106 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 RNU6-1160P-201ENST00000384546 104 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 Y_RNA.541-201ENST00000384640 113 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 MIR215-201ENST00000384858 110 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 CYCSP49-201ENST00000420810 319 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 SNX2P2-201ENST00000424553 323 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 MTCO1P5-201ENST00000433573 344 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 MTND4LP30-201ENST00000454092 297 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 RPL39P38-201ENST00000467018 153 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 RNU6-1053P-201ENST00000515930 101 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 RNU7-12P-201ENST00000516030 62 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.39□□□□□ -2.19
XRCC3O43542 MIR4778-201ENST00000577635 80 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
XRCC3O43542 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.39□□□□□ -2.19
XRCC3O43542 MIR548AY-201ENST00000617669 107 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 AC027279.3-201ENST00000625055 122 ntBASIC1.39□□□□□ -2.19
XRCC3O43542 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
XRCC3O43542 RNU6-199P-201ENST00000362954 107 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 SNORD68-201ENST00000363214 84 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 RNU6-833P-201ENST00000363486 107 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 RNU6-326P-201ENST00000365480 107 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 SNORA72.4-201ENST00000384174 132 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 RN7SKP101-201ENST00000411376 320 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 AC117454.1-201ENST00000491120 168 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 CYCTP-201ENST00000504253 315 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 RNU2-31P-201ENST00000516954 155 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 AC127455.1-201ENST00000565496 145 ntBASIC1.38□□□□□ -2.19
XRCC3O43542 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
XRCC3O43542 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 RNU6-1109P-201ENST00000391187 107 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 RNU2-14P-201ENST00000411053 191 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 AC092991.1-201ENST00000477176 376 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 HMGN1P7-201ENST00000491722 313 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 SNORA25.15-201ENST00000516487 89 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 Y_RNA.720-201ENST00000517166 92 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.37□□□□□ -2.19
XRCC3O43542 AC120024.3-201ENST00000603167 156 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 AL078604.3-201ENST00000615580 211 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 AL121890.5-201ENST00000620848 304 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
XRCC3O43542 Y_RNA.84-201ENST00000363011 104 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 RNU6-457P-201ENST00000363999 107 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 Y_RNA.203-201ENST00000364106 102 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 SNORA63C-201ENST00000364578 129 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 MIR606-201ENST00000384851 96 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 MIR522-201ENST00000385071 87 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 SNORA53-201ENST00000391141 249 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 AC108667.1-201ENST00000428618 249 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 DYNLT3P2-201ENST00000442517 295 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 AC093850.1-201ENST00000454121 251 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 RNU7-141P-201ENST00000459304 62 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 RPL23AP54-201ENST00000495129 419 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 Y_RNA.673-201ENST00000516306 88 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 RNU6-1116P-201ENST00000517269 99 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms