Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR1267-201ENST00000408723 78 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.14□□□□□ -2.07
PRPF3O43395 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 AL606517.2-201ENST00000442855 241 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 PGBD4P5-201ENST00000445958 426 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 Y_RNA.714-201ENST00000517065 90 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 AP003357.1-201ENST00000604497 148 ntBASIC2.14□□□□□ -2.07
PRPF3O43395 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF3O43395 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF3O43395 Y_RNA.267-201ENST00000364679 109 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 Y_RNA.275-201ENST00000364726 110 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 SNORA72.4-201ENST00000384174 132 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 Y_RNA.562-201ENST00000384695 113 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 RNU6-1031P-201ENST00000384773 107 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 U8.13-201ENST00000390842 128 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 SNORA26.5-201ENST00000391215 123 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 MIR548H3-201ENST00000408771 118 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 AL445685.2-201ENST00000422551 342 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 AC003989.2-201ENST00000440224 169 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 AC104332.1-201ENST00000440471 797 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 RPS4XP11-201ENST00000446897 772 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
PRPF3O43395 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.13□□□□□ -2.07
PRPF3O43395 AC103810.8-201ENST00000607347 118 ntBASIC2.13□□□□□ -2.07
PRPF3O43395 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
PRPF3O43395 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PRPF3O43395 Y_RNA.54-201ENST00000362766 105 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 RNU6-1272P-201ENST00000362776 107 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 RNU6-1048P-201ENST00000364054 107 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 Y_RNA.217-201ENST00000364214 105 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 Y_RNA.265-201ENST00000364677 108 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 Y_RNA.350-201ENST00000365409 98 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 RNU6-144P-201ENST00000383951 107 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PRPF3O43395 RNU6-763P-201ENST00000390865 106 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 AL603910.2-201ENST00000407268 136 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 RNU2-14P-201ENST00000411053 191 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.12□□□□□ -2.07
PRPF3O43395 RNU7-34P-201ENST00000459394 64 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 Y_RNA.641-201ENST00000459414 105 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 AL049830.1-201ENST00000468034 425 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 AC008834.1-201ENST00000511612 175 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 RNU6-1291P-201ENST00000516591 104 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.12□□□□□ -2.07
PRPF3O43395 MIR2681-201ENST00000581814 105 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 AL513423.1-201ENST00000621695 132 ntBASIC2.12□□□□□ -2.07
PRPF3O43395 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
PRPF3O43395 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
PRPF3O43395 AC134026.1-201ENST00000623249 2239 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PRPF3O43395 SNORD33-201ENST00000362761 85 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RNU6-899P-201ENST00000363947 107 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RNU6-740P-201ENST00000364734 105 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 U8.7-201ENST00000364940 136 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 Y_RNA.401-201ENST00000383965 117 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RNU6-1289P-201ENST00000384431 106 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 AC233266.1-201ENST00000454518 96 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RNU7-141P-201ENST00000459304 62 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 AC117454.1-201ENST00000491120 168 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RPS29P11-201ENST00000496507 171 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 AC011604.1-201ENST00000545978 196 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 POLR3GP1-201ENST00000594073 261 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 AC242852.1-201ENST00000612151 96 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 MIR548AY-201ENST00000617669 107 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 AC244015.1-201ENST00000622301 99 ntBASIC2.11□□□□□ -2.07
PRPF3O43395 RNA5SP99-201ENST00000364020 114 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 Y_RNA.242-201ENST00000364473 110 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 Y_RNA.307-201ENST00000365022 117 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 Y_RNA.416-201ENST00000384014 113 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 Y_RNA.477-201ENST00000384352 108 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 MTCO2P33-201ENST00000402100 465 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 BTF3P11-201ENST00000426582 477 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 Y_RNA.637-201ENST00000459424 114 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.1□□□□□ -2.07
PRPF3O43395 RNU7-115P-201ENST00000516433 55 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 RNU6-1007P-201ENST00000516586 107 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 AC024405.2-202ENST00000532731 184 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 AC127455.1-201ENST00000565496 145 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 AC073349.3-201ENST00000617616 186 ntBASIC2.1□□□□□ -2.07
PRPF3O43395 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PRPF3O43395 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PRPF3O43395 Y_RNA.117-201ENST00000363294 101 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 Y_RNA.277-201ENST00000364754 102 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 SNORA4.2-201ENST00000365313 147 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 MIR5688-201ENST00000580619 83 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 MIR3128-201ENST00000581957 66 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 AL929325.1-201ENST00000603096 117 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 AP000942.4-201ENST00000604811 241 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 snoU18.1-201ENST00000629629 71 ntBASIC2.09□□□□□ -2.07
PRPF3O43395 SNORA1B-201ENST00000362535 133 ntBASIC2.08□□□□□ -2.08
PRPF3O43395 SNORD27-201ENST00000363981 72 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms