Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 AP002004.2-201ENST00000531656 154 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 AC127455.1-201ENST00000565496 145 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 MIR5692C2-201ENST00000577959 77 ntBASIC1.93□□□□□ -2.1
NKX2-8O15522 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.93□□□□□ -2.1
NKX2-8O15522 SNORA1B-201ENST00000362535 133 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 RNU6-1080P-201ENST00000383982 107 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 RNU6-950P-201ENST00000384651 107 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX2-8O15522 AL358944.1-201ENST00000528537 144 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 AC005357.1-201ENST00000588399 301 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.92□□□□□ -2.1
NKX2-8O15522 AC073349.3-201ENST00000617616 186 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 MIR8054-201ENST00000620877 86 ntBASIC1.92□□□□□ -2.1
NKX2-8O15522 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NKX2-8O15522 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NKX2-8O15522 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX2-8O15522 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 Y_RNA.269-201ENST00000364685 89 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 Y_RNA.293-201ENST00000364908 93 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 SNORA4.2-201ENST00000365313 147 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 RNU6-338P-201ENST00000383888 105 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 RNU6-440P-201ENST00000390882 105 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 RNA5SP247-201ENST00000411181 105 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 COX6CP10-201ENST00000416832 224 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 HSPE1P9-201ENST00000440046 311 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX2-8O15522 SNORD2.1-201ENST00000458762 69 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 AL049830.1-201ENST00000468034 425 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX2-8O15522 RNU6-111P-201ENST00000517179 105 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 MIR4282-201ENST00000583613 67 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 AL442067.1-201ENST00000613261 223 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
NKX2-8O15522 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NKX2-8O15522 Y_RNA.4-201ENST00000362333 112 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 Y_RNA.76-201ENST00000362931 109 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 RNU6-379P-201ENST00000363813 104 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 Y_RNA.265-201ENST00000364677 108 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 RNU6-144P-201ENST00000383951 107 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 AL139156.1-201ENST00000412785 841 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 RNU6-437P-201ENST00000459408 95 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 RNU4-71P-201ENST00000516258 113 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX2-8O15522 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 AL929325.1-201ENST00000603096 117 ntBASIC1.9□□□□□ -2.11
NKX2-8O15522 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NKX2-8O15522 Y_RNA.292-201ENST00000364904 97 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 STAG3L5P-204ENST00000443759 179 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 RNU7-34P-201ENST00000459394 64 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.89□□□□□ -2.11
NKX2-8O15522 SNORD116-28-201ENST00000516123 91 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 SNORA31.10-201ENST00000516482 106 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.89□□□□□ -2.11
NKX2-8O15522 MIR4709-201ENST00000577272 72 ntBASIC1.89□□□□□ -2.11
NKX2-8O15522 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NKX2-8O15522 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NKX2-8O15522 SNORD58.1-201ENST00000391313 66 ntBASIC1.88□□□□□ -2.11
NKX2-8O15522 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX2-8O15522 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
NKX2-8O15522 RNU6-388P-201ENST00000517012 105 ntBASIC1.88□□□□□ -2.11
NKX2-8O15522 RNU6-389P-201ENST00000517048 105 ntBASIC1.88□□□□□ -2.11
NKX2-8O15522 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX2-8O15522 SNORA28-201ENST00000606769 126 ntBASIC1.88□□□□□ -2.11
NKX2-8O15522 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX2-8O15522 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NKX2-8O15522 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.87□□□□□ -2.11
NKX2-8O15522 AC005336.3-201ENST00000623833 2679 ntBASIC1.87□□□□□ -2.11
NKX2-8O15522 AC068700.1-201ENST00000565862 3754 ntBASIC1.87□□□□□ -2.11
NKX2-8O15522 Y_RNA.203-201ENST00000364106 102 ntBASIC1.87□□□□□ -2.11
NKX2-8O15522 AL034345.1-201ENST00000407768 123 ntBASIC1.87□□□□□ -2.11
NKX2-8O15522 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
NKX2-8O15522 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.87□□□□□ -2.11
NKX2-8O15522 RNU7-28P-201ENST00000516759 62 ntBASIC1.87□□□□□ -2.11
NKX2-8O15522 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NKX2-8O15522 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NKX2-8O15522 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NKX2-8O15522 MIR367-201ENST00000362299 68 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 RNU6-674P-201ENST00000363831 107 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 Y_RNA.304-201ENST00000365011 112 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 Y_RNA.552-201ENST00000384665 112 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 RNU6-360P-201ENST00000390944 104 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 RNA5SP482-201ENST00000391269 118 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.86□□□□□ -2.11
NKX2-8O15522 AC108667.1-201ENST00000428618 249 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.86□□□□□ -2.11
NKX2-8O15522 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.86□□□□□ -2.11
NKX2-8O15522 AC108729.3-201ENST00000513484 108 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.86□□□□□ -2.11
NKX2-8O15522 MIR4724-201ENST00000579485 89 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 MIR2681-201ENST00000581814 105 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
NKX2-8O15522 Y_RNA.802-201ENST00000614892 130 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms