Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHOXO15266 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
SHOXO15266 Y_RNA.81-201ENST00000362997 102 ntBASIC2.63□□□□□ -1.99
SHOXO15266 Y_RNA.563-201ENST00000384707 108 ntBASIC2.63□□□□□ -1.99
SHOXO15266 MIR891A-201ENST00000401237 79 ntBASIC2.63□□□□□ -1.99
SHOXO15266 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
SHOXO15266 HMGN2P32-201ENST00000444648 269 ntBASIC2.63□□□□□ -1.99
SHOXO15266 AC096725.1-201ENST00000514266 313 ntBASIC2.63□□□□□ -1.99
SHOXO15266 RNU6-693P-201ENST00000516134 107 ntBASIC2.63□□□□□ -1.99
SHOXO15266 RNU6-1270P-201ENST00000517128 108 ntBASIC2.63□□□□□ -1.99
SHOXO15266 MIR3922-201ENST00000585192 84 ntBASIC2.63□□□□□ -1.99
SHOXO15266 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.63□□□□□ -1.99
SHOXO15266 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.63□□□□□ -1.99
SHOXO15266 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SHOXO15266 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SHOXO15266 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHOXO15266 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHOXO15266 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOXO15266 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHOXO15266 Y_RNA.52-201ENST00000362760 96 ntBASIC2.62□□□□□ -1.99
SHOXO15266 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
SHOXO15266 RNU6-647P-201ENST00000364243 107 ntBASIC2.62□□□□□ -1.99
SHOXO15266 RNU6-1056P-201ENST00000383996 107 ntBASIC2.62□□□□□ -1.99
SHOXO15266 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
SHOXO15266 SNORD61-201ENST00000384252 73 ntBASIC2.62□□□□□ -1.99
SHOXO15266 RNU6-950P-201ENST00000384651 107 ntBASIC2.62□□□□□ -1.99
SHOXO15266 AL158823.1-201ENST00000418441 478 ntBASIC2.62□□□□□ -1.99
SHOXO15266 Y_RNA.712-201ENST00000517011 92 ntBASIC2.62□□□□□ -1.99
SHOXO15266 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOXO15266 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.62□□□□□ -1.99
SHOXO15266 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.62□□□□□ -1.99
SHOXO15266 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
SHOXO15266 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SHOXO15266 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHOXO15266 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.61□□□□□ -1.99
SHOXO15266 Y_RNA.336-201ENST00000365307 109 ntBASIC2.61□□□□□ -1.99
SHOXO15266 Y_RNA.500-201ENST00000384466 111 ntBASIC2.61□□□□□ -1.99
SHOXO15266 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHOXO15266 RNA5SP465-201ENST00000391195 109 ntBASIC2.61□□□□□ -1.99
SHOXO15266 AF228730.3-201ENST00000436691 102 ntBASIC2.61□□□□□ -1.99
SHOXO15266 AL158147.1-201ENST00000443970 75 ntBASIC2.61□□□□□ -1.99
SHOXO15266 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.61□□□□□ -1.99
SHOXO15266 Y_RNA.666-201ENST00000516187 112 ntBASIC2.61□□□□□ -1.99
SHOXO15266 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
SHOXO15266 MIR3200-201ENST00000580767 85 ntBASIC2.61□□□□□ -1.99
SHOXO15266 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHOXO15266 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
SHOXO15266 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHOXO15266 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHOXO15266 Y_RNA.114-201ENST00000363265 113 ntBASIC2.6□□□□□ -1.99
SHOXO15266 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.6□□□□□ -1.99
SHOXO15266 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
SHOXO15266 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOXO15266 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOXO15266 MIR3121-201ENST00000579680 77 ntBASIC2.6□□□□□ -1.99
SHOXO15266 AC005000.2-201ENST00000605468 310 ntBASIC2.6□□□□□ -1.99
SHOXO15266 AC022202.1-201ENST00000613515 211 ntBASIC2.6□□□□□ -1.99
SHOXO15266 U6.95-201ENST00000636931 70 ntBASIC2.6□□□□□ -1.99
SHOXO15266 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.6□□□□□ -1.99
SHOXO15266 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.6□□□□□ -1.99
SHOXO15266 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SHOXO15266 RNU6-235P-201ENST00000362644 107 ntBASIC2.59□□□□□ -1.99
SHOXO15266 Y_RNA.294-201ENST00000364916 102 ntBASIC2.59□□□□□ -1.99
SHOXO15266 RNU6-215P-201ENST00000365169 102 ntBASIC2.59□□□□□ -1.99
SHOXO15266 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHOXO15266 SNORA1-201ENST00000384107 130 ntBASIC2.59□□□□□ -1.99
SHOXO15266 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
SHOXO15266 MIR548O-201ENST00000408583 114 ntBASIC2.59□□□□□ -1.99
SHOXO15266 RNA5SP229-201ENST00000410809 99 ntBASIC2.59□□□□□ -1.99
SHOXO15266 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.59□□□□□ -1.99
SHOXO15266 RNU7-107P-201ENST00000459121 61 ntBASIC2.59□□□□□ -1.99
SHOXO15266 RNU5E-3P-201ENST00000515913 68 ntBASIC2.59□□□□□ -1.99
SHOXO15266 RNU6-772P-201ENST00000516042 105 ntBASIC2.59□□□□□ -1.99
SHOXO15266 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
SHOXO15266 AC133485.4-201ENST00000561835 220 ntBASIC2.59□□□□□ -1.99
SHOXO15266 AC138907.4-201ENST00000570107 226 ntBASIC2.59□□□□□ -1.99
SHOXO15266 MIR3124-201ENST00000582636 67 ntBASIC2.59□□□□□ -1.99
SHOXO15266 AC006441.5-201ENST00000612680 209 ntBASIC2.59□□□□□ -1.99
SHOXO15266 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHOXO15266 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.59□□□□□ -2
SHOXO15266 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SHOXO15266 Y_RNA.280-201ENST00000364765 112 ntBASIC2.58□□□□□ -2
SHOXO15266 SNORD20-201ENST00000384550 80 ntBASIC2.58□□□□□ -2
SHOXO15266 RNU11-3P-201ENST00000391111 133 ntBASIC2.58□□□□□ -2
SHOXO15266 STAG3L5P-204ENST00000443759 179 ntBASIC2.58□□□□□ -2
SHOXO15266 SNORD45.4-201ENST00000516629 73 ntBASIC2.58□□□□□ -2
SHOXO15266 RNU6-919P-201ENST00000516731 104 ntBASIC2.58□□□□□ -2
SHOXO15266 AC084364.2-201ENST00000546924 395 ntBASIC2.58□□□□□ -2
SHOXO15266 MIR5094-201ENST00000578766 85 ntBASIC2.58□□□□□ -2
SHOXO15266 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.58□□□□□ -2
SHOXO15266 uc_338.25-201ENST00000613756 156 ntBASIC2.58□□□□□ -2
SHOXO15266 AC134878.1-201ENST00000619901 243 ntBASIC2.58□□□□□ -2
SHOXO15266 AC022513.1-201ENST00000624512 117 ntBASIC2.58□□□□□ -2
SHOXO15266 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHOXO15266 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SHOXO15266 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
SHOXO15266 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.57□□□□□ -2
SHOXO15266 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
SHOXO15266 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
SHOXO15266 SNORA38.1-201ENST00000364172 131 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms