Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
AP3D1O14617 MIR3145-201ENST00000580727 82 ntBASIC1.35□□□□□ -2.19
AP3D1O14617 AC124312.5-201ENST00000604451 268 ntBASIC1.35□□□□□ -2.19
AP3D1O14617 AP003357.1-201ENST00000604497 148 ntBASIC1.35□□□□□ -2.19
AP3D1O14617 Y_RNA.128-201ENST00000363391 112 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 Y_RNA.383-201ENST00000383855 97 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 RNU6-823P-201ENST00000391042 103 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 snoU13.23-201ENST00000458863 104 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 RNU6-1046P-201ENST00000516538 107 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 AC104695.3-201ENST00000604052 296 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.34□□□□□ -2.19
AP3D1O14617 MIR7843-201ENST00000622274 79 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 AC134503.1-201ENST00000633048 54 ntBASIC1.34□□□□□ -2.19
AP3D1O14617 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
AP3D1O14617 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 Y_RNA.222-201ENST00000364264 102 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 Y_RNA.286-201ENST00000364813 102 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 MIR452-201ENST00000385020 85 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.33□□□□□ -2.2
AP3D1O14617 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.33□□□□□ -2.2
AP3D1O14617 MIR4300-201ENST00000581016 96 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 MIR4303-201ENST00000581299 66 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 POLR3GP1-201ENST00000594073 261 ntBASIC1.33□□□□□ -2.2
AP3D1O14617 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.33□□□□□ -2.2
AP3D1O14617 Y_RNA.183-201ENST00000363882 113 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 POLR2KP2-201ENST00000438155 177 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 RNU7-115P-201ENST00000516433 55 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 Y_RNA.711-201ENST00000516993 102 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 Y_RNA.721-201ENST00000517207 102 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 RNU6-988P-201ENST00000519081 107 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 AC024405.2-202ENST00000532731 184 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 AC127455.1-201ENST00000565496 145 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 RAC1P9-201ENST00000604990 392 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 AL022345.2-201ENST00000606307 135 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
AP3D1O14617 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3D1O14617 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 AC117470.1-201ENST00000381974 330 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 SNORA17.3-201ENST00000391159 129 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 MIR1298-201ENST00000408783 112 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 MIR1252-201ENST00000408861 65 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3D1O14617 AC108210.2-201ENST00000503681 201 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 MIR376A1-201ENST00000616574 68 ntBASIC1.31□□□□□ -2.2
AP3D1O14617 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP3D1O14617 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP3D1O14617 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
AP3D1O14617 SNORD113-8-201ENST00000363497 74 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 RNU6-450P-201ENST00000364654 107 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 U8.7-201ENST00000364940 136 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
AP3D1O14617 SNORD115-46-201ENST00000390982 71 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 RNU6-131P-201ENST00000391144 107 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 RNU6-101P-201ENST00000410323 104 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 MLLT10P1-201ENST00000418346 262 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 SNRPGP10-201ENST00000432323 225 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 AC245047.7-201ENST00000440265 293 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 MTCYBP6-201ENST00000441810 138 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 SNORA31.4-201ENST00000516049 129 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 RNU6-397P-201ENST00000516226 104 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 RNU6-897P-201ENST00000517135 105 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 AC015712.3-201ENST00000559380 164 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 MIR6715A-201ENST00000615929 79 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 MIR548AY-201ENST00000617669 107 ntBASIC1.3□□□□□ -2.2
AP3D1O14617 RNU4-80P-201ENST00000363200 141 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 Y_RNA.138-201ENST00000363462 102 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 Y_RNA.203-201ENST00000364106 102 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 SNORA22B-201ENST00000383876 138 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 RNU6-969P-201ENST00000383900 105 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 RNU6-1248P-201ENST00000391096 64 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 MIR548P-201ENST00000408336 84 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 HSPE1P25-201ENST00000455484 251 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 RPL39P39-201ENST00000455840 151 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 LINC01399-202ENST00000458450 244 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 AC117454.1-201ENST00000491120 168 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.29□□□□□ -2.2
AP3D1O14617 SNORD116-28-201ENST00000516123 91 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 Y_RNA.714-201ENST00000517065 90 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.29□□□□□ -2.2
AP3D1O14617 AC020661.2-201ENST00000560114 134 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 AC104984.5-201ENST00000586878 94 ntBASIC1.29□□□□□ -2.2
AP3D1O14617 AL442644.1-201ENST00000454390 3105 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 RNU6-1084P-201ENST00000362498 107 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 SNORD50B-201ENST00000364995 70 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 snoU2-30.1-201ENST00000365012 70 ntBASIC1.28□□□□□ -2.2
AP3D1O14617 Y_RNA.389-201ENST00000383924 113 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms