Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
SLC28A1O00337 MIR4423-201ENST00000580922 80 ntBASIC0.95□□□□□ -2.26
SLC28A1O00337 RPS29P30-201ENST00000600975 111 ntBASIC0.95□□□□□ -2.26
SLC28A1O00337 snoU13.31-201ENST00000607291 104 ntBASIC0.95□□□□□ -2.26
SLC28A1O00337 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
SLC28A1O00337 AC091925.1-201ENST00000623204 462 ntBASIC0.95□□□□□ -2.26
SLC28A1O00337 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SLC28A1O00337 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
SLC28A1O00337 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SLC28A1O00337 Y_RNA.263-201ENST00000364659 114 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 snoU2-30.1-201ENST00000365012 70 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 Y_RNA.331-201ENST00000365267 102 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 Y_RNA.462-201ENST00000384268 102 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 Y_RNA.496-201ENST00000384444 101 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 MIR15B-201ENST00000385045 98 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 MIR516B2-201ENST00000385190 85 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 MIR136-201ENST00000385207 82 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 RNU6-131P-201ENST00000391144 107 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 AC024067.1-201ENST00000426199 223 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.94□□□□□ -2.26
SLC28A1O00337 HMGN2P32-201ENST00000444648 269 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
SLC28A1O00337 SNORD45.4-201ENST00000516629 73 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 Y_RNA.714-201ENST00000517065 90 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 MIR5188-201ENST00000583467 113 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 AL391903.3-201ENST00000612158 163 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 AC104985.2-201ENST00000620598 500 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 AC091895.1-201ENST00000624494 256 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.94□□□□□ -2.26
SLC28A1O00337 AC008163.1-202ENST00000636004 2889 ntBASIC0.94□□□□□ -2.26
SLC28A1O00337 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SLC28A1O00337 Y_RNA.252-201ENST00000364556 101 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 RNU1-115P-201ENST00000365329 160 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 Y_RNA.341-201ENST00000365341 102 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 AC117470.1-201ENST00000381974 330 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 SNRPGP10-201ENST00000432323 225 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 AL160004.2-201ENST00000432935 350 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 RNU6-976P-201ENST00000516086 111 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 SNORA40.14-201ENST00000516543 86 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 RNU4-77P-201ENST00000516692 156 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 RNU7-116P-201ENST00000516940 62 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.93□□□□□ -2.26
SLC28A1O00337 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 MIR3192-201ENST00000584920 77 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 AL121655.1-201ENST00000605811 308 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 AL606534.2-204ENST00000635008 178 ntBASIC0.93□□□□□ -2.26
SLC28A1O00337 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
SLC28A1O00337 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 RNU6-1323P-201ENST00000384025 107 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 SNORA75.2-201ENST00000391138 150 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 SNORA75.3-201ENST00000391231 150 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 MTND5P20-201ENST00000448677 143 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
SLC28A1O00337 RNU7-21P-201ENST00000459430 62 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 RNU7-110P-201ENST00000516891 62 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 SNORA74.3-201ENST00000517108 154 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.92□□□□□ -2.26
SLC28A1O00337 AC093027.1-201ENST00000546698 429 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 AC136932.1-201ENST00000574771 208 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 PRELID3BP2-201ENST00000605362 201 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 AC011373.1-201ENST00000607270 237 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
SLC28A1O00337 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SLC28A1O00337 Y_RNA.310-201ENST00000365063 113 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 SNORD14.1-201ENST00000365609 90 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 RNU6-969P-201ENST00000383900 105 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 Y_RNA.456-201ENST00000384232 111 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 Y_RNA.458-201ENST00000384240 102 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 Y_RNA.526-201ENST00000384572 110 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 MIR520C-201ENST00000385005 87 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 RNU7-90P-201ENST00000459216 62 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 RNU6-507P-201ENST00000516045 100 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 Y_RNA.702-201ENST00000516843 96 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 AC090142.3-201ENST00000519012 385 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 MIR548S-201ENST00000581352 82 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 MIR4801-201ENST00000582704 82 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 DEFB117-201ENST00000602356 141 ntBASIC0.91□□□□□ -2.26
SLC28A1O00337 Y_RNA.368-201ENST00000365547 113 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 AL590004.1-201ENST00000405321 300 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 AF228730.4-201ENST00000421457 183 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.9□□□□□ -2.27
SLC28A1O00337 snoU13.25-201ENST00000458945 104 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 Y_RNA.713-201ENST00000517013 96 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.9□□□□□ -2.27
SLC28A1O00337 POLR3GP1-201ENST00000594073 261 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 AC112487.2-201ENST00000637950 304 ntBASIC0.9□□□□□ -2.27
SLC28A1O00337 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
SLC28A1O00337 Y_RNA.5-201ENST00000362334 102 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 SNORD50B-201ENST00000364995 70 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 Y_RNA.439-201ENST00000384119 94 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 RNU6-21P-201ENST00000384710 107 ntBASIC0.89□□□□□ -2.27
SLC28A1O00337 MTND1P14-201ENST00000427400 950 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms