Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC139792.2-201ENST00000624218 587 ntBASIC0.86□□□□□ -2.27
HMGB1P1B2RPK0 AC008133.2-201ENST00000624540 351 ntBASIC0.86□□□□□ -2.27
HMGB1P1B2RPK0 Y_RNA.248-201ENST00000364501 109 ntBASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 RNU7-95P-201ENST00000459222 64 ntBASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 AC006600.1-201ENST00000572529 153 ntBASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 MIR6516-201ENST00000630554 81 ntBASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HMGB1P1B2RPK0 RNU1-17P-201ENST00000363022 152 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 MIR802-201ENST00000390235 94 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 AC005534.2-201ENST00000431047 433 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 RNU6-699P-201ENST00000517081 110 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 AC011195.1-201ENST00000578177 177 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 DEFB117-201ENST00000602356 141 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 AC138305.3-201ENST00000624988 240 ntBASIC0.84□□□□□ -2.27
HMGB1P1B2RPK0 Y_RNA.230-201ENST00000364348 109 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 SNORD111-201ENST00000408139 94 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 MIR1302-7-201ENST00000408841 72 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 snoU13.26-201ENST00000459452 105 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 AC117454.1-201ENST00000491120 168 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 RPL23AP54-201ENST00000495129 419 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 AC005730.3-201ENST00000583067 366 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 AC113139.1-201ENST00000605049 239 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 JPX_2.1-201ENST00000614161 69 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 AL157834.3-201ENST00000615543 103 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 U6atac.1-201ENST00000616025 117 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 AC022306.2-201ENST00000617563 647 ntBASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.474-201ENST00000384341 102 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 SNORD38C-201ENST00000384381 69 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 MIR559-201ENST00000385188 96 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 RNU4-62P-201ENST00000410125 130 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 AC005042.3-201ENST00000453230 174 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 AC133104.2-201ENST00000615272 193 ntBASIC0.82□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.27-201ENST00000362540 103 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.203-201ENST00000364106 102 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.259-201ENST00000364619 101 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 SNORD113.3-201ENST00000364630 78 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.331-201ENST00000365267 102 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 RNU6-710P-201ENST00000410424 105 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 U8.19-201ENST00000459095 133 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 RNU4-54P-201ENST00000516428 129 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 AC024405.2-202ENST00000532731 184 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 AP000942.3-201ENST00000603702 160 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 MIR6078-201ENST00000611069 100 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HMGB1P1B2RPK0 RNU6-1323P-201ENST00000384025 107 ntBASIC0.8□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.570-201ENST00000384750 101 ntBASIC0.8□□□□□ -2.28
HMGB1P1B2RPK0 AC099799.1-201ENST00000439809 192 ntBASIC0.8□□□□□ -2.28
HMGB1P1B2RPK0 MIR3145-201ENST00000580727 82 ntBASIC0.8□□□□□ -2.28
HMGB1P1B2RPK0 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
HMGB1P1B2RPK0 AC092794.1-201ENST00000612734 582 ntBASIC0.8□□□□□ -2.28
HMGB1P1B2RPK0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 RNU6-490P-201ENST00000362985 107 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 Y_RNA.310-201ENST00000365063 113 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 SNORA36.2-201ENST00000384004 127 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 RNU1-119P-201ENST00000391122 165 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 SNORA11.2-201ENST00000408318 127 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 AL392103.1-201ENST00000447000 198 ntBASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGB1P1B2RPK0 U8.7-201ENST00000364940 136 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 MIR1278-201ENST00000408753 81 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 AC091951.2-201ENST00000500762 203 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 RNU11-2P-201ENST00000516898 142 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 RNU7-116P-201ENST00000516940 62 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 MIR3945-201ENST00000581853 98 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
HMGB1P1B2RPK0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 AC098869.1-201ENST00000481627 292 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RNA5SP121-201ENST00000516537 101 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RNU7-110P-201ENST00000516891 62 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RNU7-181P-201ENST00000517234 74 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 VN1R91P-201ENST00000594377 169 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RBM11P1-201ENST00000604951 799 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 AL355073.2-201ENST00000612106 557 ntBASIC0.77□□□□□ -2.29
HMGB1P1B2RPK0 RNU6-442P-201ENST00000383968 104 ntBASIC0.76□□□□□ -2.29
HMGB1P1B2RPK0 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
HMGB1P1B2RPK0 Y_RNA.619-201ENST00000410951 90 ntBASIC0.76□□□□□ -2.29
HMGB1P1B2RPK0 AP1B1P2-201ENST00000416196 106 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms