Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-179P-201ENST00000363350 107 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 SNORD38C-201ENST00000384381 69 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 SNORD38B-201ENST00000384690 67 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 AC006210.1-201ENST00000424882 111 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 HSPE1P23-201ENST00000509838 286 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 AL133255.1-201ENST00000606374 441 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 RNU6-86P-201ENST00000606534 107 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 RNU6-88P-201ENST00000606801 100 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 Z97988.1-201ENST00000637697 135 ntBASIC-1.19□□□□□ -2.6
CPSF4LA6NMK7 RNU6-266P-201ENST00000364225 107 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 SNORD114-15-201ENST00000364687 72 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 SNORD115-44-201ENST00000365391 82 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 RNU6-24P-201ENST00000384440 107 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 RNA5SP470-201ENST00000516463 106 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 SNORA25.14-201ENST00000516481 132 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 SNORD38.3-201ENST00000516599 73 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 RNU7-188P-201ENST00000517063 64 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 AL355297.3-201ENST00000604082 446 ntBASIC-1.2□□□□□ -2.6
CPSF4LA6NMK7 RNU6-324P-201ENST00000363957 106 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 RNA5SP245-201ENST00000364239 121 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 MT-TY-201ENST00000387409 66 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 SNORD41.1-201ENST00000391000 69 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 UQCRBP2-201ENST00000447827 297 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 MTCO2P29-201ENST00000465212 189 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 SNORA25.10-201ENST00000515926 124 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 RNU6-551P-201ENST00000516661 103 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 AC090616.2-202ENST00000584248 222 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 MIR6738-201ENST00000619620 64 ntBASIC-1.21□□□□□ -2.6
CPSF4LA6NMK7 RNU6-560P-201ENST00000364007 108 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 MTND3P9-201ENST00000429526 346 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 AC236972.2-201ENST00000434979 310 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 RN7SKP19-201ENST00000516016 252 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 RNU2-69P-201ENST00000516061 100 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 RNU7-161P-201ENST00000517289 62 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 MIR3684-201ENST00000579779 74 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 MIR4324-201ENST00000584846 72 ntBASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.22□□□□□ -2.6
CPSF4LA6NMK7 RNU6-403P-201ENST00000363163 104 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 RNU6-131P-201ENST00000391144 107 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 AC096949.1-201ENST00000412047 152 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 AC244505.6-201ENST00000452829 130 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 MTND2P30-201ENST00000456663 382 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 GMFBP1-201ENST00000467831 427 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 MTCO3P23-201ENST00000561363 289 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 MIR8055-201ENST00000610739 97 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 AP002371.2-201ENST00000624450 503 ntBASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.23□□□□□ -2.61
CPSF4LA6NMK7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 RNU6-757P-201ENST00000410334 100 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 RNU6-602P-201ENST00000411155 105 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AL008987.1-201ENST00000415528 237 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AC137499.1-201ENST00000427602 88 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 RNA5SP484-201ENST00000458857 111 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 RNU6-437P-201ENST00000459408 95 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 RNU6-175P-201ENST00000516896 107 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 MTND1P35-201ENST00000526739 508 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AC024405.2-202ENST00000532731 184 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AC140658.3-201ENST00000567603 271 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AL360085.1-201ENST00000604713 532 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AC005828.6-201ENST00000606610 232 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 AL136370.1-201ENST00000608166 691 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.24□□□□□ -2.61
CPSF4LA6NMK7 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 SNORA63.5-201ENST00000363548 123 ntBASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 SNORD14E-201ENST00000364009 85 ntBASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 MTCYBP4-201ENST00000401524 249 ntBASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 USP9YP21-201ENST00000420603 432 ntBASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 MTATP6P17-201ENST00000431030 672 ntBASIC-1.25□□□□□ -2.61
CPSF4LA6NMK7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms