Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 SNORD113.3-201ENST00000364630 78 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.573-201ENST00000384763 105 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 AC067940.1-201ENST00000458411 300 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 U8.19-201ENST00000459095 133 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.43□□□□□ -2.34
SMCO2A6NFE2 AC116353.2-201ENST00000505332 712 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.43□□□□□ -2.34
SMCO2A6NFE2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.43□□□□□ -2.34
SMCO2A6NFE2 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
SMCO2A6NFE2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.43□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.2-201ENST00000362330 96 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.295-201ENST00000364918 102 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 AL031003.1-201ENST00000404229 172 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 AL353997.1-201ENST00000432936 108 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 HMGN2P32-201ENST00000444648 269 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 AC105313.1-201ENST00000509121 353 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 SNORA18.7-201ENST00000516910 131 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.708-201ENST00000516950 96 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.42□□□□□ -2.34
SMCO2A6NFE2 AC240442.1-201ENST00000616055 283 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 U4.5-201ENST00000617137 123 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 MIR6516-201ENST00000630554 81 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.172-201ENST00000363765 102 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-961P-201ENST00000363893 105 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 SNORD50B-201ENST00000364995 70 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU2-54P-201ENST00000410299 190 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-613P-201ENST00000410412 108 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-994P-201ENST00000410507 111 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-1199P-201ENST00000411249 104 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-1304P-201ENST00000411374 106 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RNU6-408P-201ENST00000515910 100 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 RBM11P1-201ENST00000604951 799 ntBASIC0.41□□□□□ -2.34
SMCO2A6NFE2 Y_RNA.101-201ENST00000363154 102 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 Y_RNA.404-201ENST00000383978 102 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 Y_RNA.482-201ENST00000384377 111 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 RPL17P19-201ENST00000489069 552 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.4□□□□□ -2.35
SMCO2A6NFE2 RNU6-1012P-201ENST00000516606 109 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 AC005899.2-201ENST00000584353 90 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 AC090517.2-201ENST00000614966 680 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 MIR3688-2-201ENST00000636963 87 ntBASIC0.4□□□□□ -2.35
SMCO2A6NFE2 RNU6-654P-201ENST00000364373 107 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 snoU2-30.1-201ENST00000365012 70 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 SNORA72-201ENST00000384339 132 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 SNORD105-201ENST00000386910 85 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 RNU6-510P-201ENST00000391239 108 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AL390729.2-201ENST00000416137 156 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 RPS3AP52-201ENST00000435639 297 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.39□□□□□ -2.35
SMCO2A6NFE2 RNU6-720P-201ENST00000516363 108 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AC104695.3-201ENST00000604052 296 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AC092794.2-201ENST00000620933 563 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AC008133.2-201ENST00000624540 351 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
SMCO2A6NFE2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SMCO2A6NFE2 RNU6-369P-201ENST00000362515 102 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 RNY1P8-201ENST00000383970 114 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 MIR548F5-201ENST00000408421 86 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 MTND4P28-201ENST00000426217 387 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 MTND3P10-201ENST00000450967 341 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 RPL7P42-201ENST00000481005 679 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 RNU6-830P-201ENST00000516353 107 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.38□□□□□ -2.35
SMCO2A6NFE2 AL355375.2-201ENST00000574825 175 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 AC005972.2-201ENST00000604690 348 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 AC087588.2-201ENST00000617667 426 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 MIR4251-201ENST00000635819 61 ntBASIC0.38□□□□□ -2.35
SMCO2A6NFE2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SMCO2A6NFE2 Y_RNA.168-201ENST00000363740 102 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 Y_RNA.370-201ENST00000365589 108 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 RNU6-601P-201ENST00000384540 107 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 MTND3P8-201ENST00000412909 339 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 MTCO2P12-201ENST00000427426 682 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 SNRPGP10-201ENST00000432323 225 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.37□□□□□ -2.35
SMCO2A6NFE2 AC092989.1-201ENST00000481235 277 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 RNU6-436P-201ENST00000516171 114 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 MIR548AR-201ENST00000582191 57 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 AC006380.1-201ENST00000603598 186 ntBASIC0.37□□□□□ -2.35
SMCO2A6NFE2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.37□□□□□ -2.35
SMCO2A6NFE2 RNU6-1084P-201ENST00000362498 107 ntBASIC0.36□□□□□ -2.35
SMCO2A6NFE2 RNU6-580P-201ENST00000365159 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms