Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC027279.3-201ENST00000625055 122 ntBASIC1□□□□□ -2.25
LRIT2A6NDA9 AL606534.2-204ENST00000635008 178 ntBASIC1□□□□□ -2.25
LRIT2A6NDA9 RNU4-73P-201ENST00000363164 141 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 U8.5-201ENST00000364528 136 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.253-201ENST00000364562 112 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 RNU6-855P-201ENST00000410395 104 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 RNU6-1054P-201ENST00000411293 104 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.99□□□□□ -2.25
LRIT2A6NDA9 MTND1P14-201ENST00000427400 950 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 SNORA31.4-201ENST00000516049 129 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 SNORA70.22-201ENST00000517160 124 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.99□□□□□ -2.25
LRIT2A6NDA9 AC022616.4-201ENST00000522985 181 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 MIR4795-201ENST00000584182 89 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 MIR4762-201ENST00000585261 75 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 RPS29P30-201ENST00000600975 111 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 AC005972.2-201ENST00000604690 348 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.772-201ENST00000606692 102 ntBASIC0.99□□□□□ -2.25
LRIT2A6NDA9 RNU4-79P-201ENST00000362764 141 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.80-201ENST00000362996 102 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.331-201ENST00000365267 102 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.458-201ENST00000384240 102 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.485-201ENST00000384395 102 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.579-201ENST00000390939 94 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
LRIT2A6NDA9 AC245047.7-201ENST00000440265 293 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.98□□□□□ -2.25
LRIT2A6NDA9 RPL39P39-201ENST00000455840 151 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 SNORA40.14-201ENST00000516543 86 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 AL121655.1-201ENST00000605811 308 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 AL008636.1-201ENST00000625038 1018 ntBASIC0.98□□□□□ -2.25
LRIT2A6NDA9 RNY1P10-201ENST00000363268 113 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.336-201ENST00000365307 109 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 Y_RNA.462-201ENST00000384268 102 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 SNORA72-201ENST00000384339 132 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 RNY1P14-201ENST00000384426 108 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 RNU6-710P-201ENST00000410424 105 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 COX6CP14-201ENST00000469580 174 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 SNORD111.1-201ENST00000516421 86 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.97□□□□□ -2.25
LRIT2A6NDA9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.97□□□□□ -2.25
LRIT2A6NDA9 DEFB117-201ENST00000602356 141 ntBASIC0.97□□□□□ -2.25
LRIT2A6NDA9 SNORD81.1-201ENST00000363064 77 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.197-201ENST00000364004 102 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 MIR522-201ENST00000385071 87 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 MT-TD-201ENST00000387419 68 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 AL390729.2-201ENST00000416137 156 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 MLLT10P1-201ENST00000418346 262 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 LINC01399-202ENST00000458450 244 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 HMGN1P7-201ENST00000491722 313 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 RNU7-110P-201ENST00000516891 62 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
LRIT2A6NDA9 AC011373.1-201ENST00000607270 237 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 AC006157.1-201ENST00000611750 366 ntBASIC0.96□□□□□ -2.26
LRIT2A6NDA9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
LRIT2A6NDA9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LRIT2A6NDA9 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 AL590004.1-201ENST00000405321 300 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 MIR1298-201ENST00000408783 112 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 RNA5SP247-201ENST00000411181 105 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.95□□□□□ -2.26
LRIT2A6NDA9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.95□□□□□ -2.26
LRIT2A6NDA9 AL096861.1-201ENST00000610899 123 ntBASIC0.95□□□□□ -2.26
LRIT2A6NDA9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.95□□□□□ -2.26
LRIT2A6NDA9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LRIT2A6NDA9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.310-201ENST00000365063 113 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.341-201ENST00000365341 102 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.439-201ENST00000384119 94 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 RNU6-937P-201ENST00000384325 106 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.526-201ENST00000384572 110 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.551-201ENST00000384661 102 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 MIR516B2-201ENST00000385190 85 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 RNU4-30P-201ENST00000410245 143 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 U8.20-201ENST00000459445 131 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.94□□□□□ -2.26
LRIT2A6NDA9 AL117351.2-201ENST00000513571 157 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 AL133255.1-201ENST00000606374 441 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 AC007485.1-201ENST00000616755 206 ntBASIC0.94□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.143-201ENST00000363520 106 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.368-201ENST00000365547 113 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 RNU6-1323P-201ENST00000384025 107 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.456-201ENST00000384232 111 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 Y_RNA.471-201ENST00000384312 102 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 SNORD45.4-201ENST00000516629 73 ntBASIC0.93□□□□□ -2.26
LRIT2A6NDA9 AC040926.1-201ENST00000530195 238 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms