Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP17L3A6NCW0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
USP17L3A6NCW0 RNU6-23P-201ENST00000363283 107 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 RNA5SP493-201ENST00000364115 91 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 RNU6-309P-201ENST00000364573 106 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 SNORD58C-201ENST00000365223 64 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 MIR522-201ENST00000385071 87 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 AC092427.1-202ENST00000430569 476 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 FTH1P12-201ENST00000432137 551 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.42□□□□□ -1.86
USP17L3A6NCW0 RN7SKP282-201ENST00000516824 299 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.42□□□□□ -1.86
USP17L3A6NCW0 AC091544.4-201ENST00000555268 342 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 AL670379.3-201ENST00000605040 251 ntBASIC3.42□□□□□ -1.86
USP17L3A6NCW0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP17L3A6NCW0 RNU6-859P-201ENST00000362728 107 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 RNU6-862P-201ENST00000362804 105 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 SNORA11.4-201ENST00000408823 129 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 AC104389.3-201ENST00000445629 235 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 RN7SL633P-201ENST00000488974 297 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 RNU6-693P-201ENST00000516134 107 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 SNORD33.1-201ENST00000516213 88 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 CYCSP26-201ENST00000534107 320 ntBASIC3.41□□□□□ -1.86
USP17L3A6NCW0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP17L3A6NCW0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP17L3A6NCW0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP17L3A6NCW0 RNY4P18-201ENST00000391107 89 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 Y_RNA.617-201ENST00000410920 90 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 RNA5SP508-201ENST00000411327 119 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 RN7SL330P-201ENST00000469709 307 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 TRBV12-1-201ENST00000479785 344 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 Y_RNA.709-201ENST00000516952 92 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.4□□□□□ -1.87
USP17L3A6NCW0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.4□□□□□ -1.87
USP17L3A6NCW0 AC104984.5-201ENST00000586878 94 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP17L3A6NCW0 AL391516.1-201ENST00000554380 2449 ntBASIC3.4□□□□□ -1.87
USP17L3A6NCW0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
USP17L3A6NCW0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP17L3A6NCW0 SNORD68-201ENST00000363214 84 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 RNA5SP21-201ENST00000410917 96 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 PDCD5P2-201ENST00000507570 312 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.39□□□□□ -1.87
USP17L3A6NCW0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 MIR3169-201ENST00000578032 83 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 CTSLP2-204ENST00000629029 392 ntBASIC3.39□□□□□ -1.87
USP17L3A6NCW0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP17L3A6NCW0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP17L3A6NCW0 MTND5P32-201ENST00000560711 1802 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 SNORD14E-201ENST00000364009 85 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.38□□□□□ -1.87
USP17L3A6NCW0 Z96811.1-201ENST00000445880 108 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 RN7SL297P-201ENST00000483161 293 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 MIR4762-201ENST00000585261 75 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 MIR6715A-201ENST00000615929 79 ntBASIC3.38□□□□□ -1.87
USP17L3A6NCW0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
USP17L3A6NCW0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.37□□□□□ -1.87
USP17L3A6NCW0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP17L3A6NCW0 SNORA63.4-201ENST00000362763 126 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 RNU6-508P-201ENST00000363231 103 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 U8.5-201ENST00000364528 136 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 Y_RNA.346-201ENST00000365385 112 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 RNU6-442P-201ENST00000383968 104 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 MIR548A3-201ENST00000385297 97 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 RNA5SP293-201ENST00000410527 113 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 Y_RNA.630-201ENST00000411370 108 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 AL513328.1-201ENST00000446460 224 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 UQCRHP3-201ENST00000451503 251 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 AL021397.1-201ENST00000451806 248 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 RNU6-589P-201ENST00000516485 107 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 AC108081.1-201ENST00000604358 221 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 AL121890.5-201ENST00000620848 304 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.37□□□□□ -1.87
USP17L3A6NCW0 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
USP17L3A6NCW0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
USP17L3A6NCW0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 RNA5SP68-201ENST00000363885 119 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 RNU6-1164P-201ENST00000364428 107 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 MIR548A2-201ENST00000384956 97 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 MIR29C-201ENST00000385231 88 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 AC245047.3-201ENST00000429428 127 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 Y_RNA.651-201ENST00000459380 103 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 RN7SKP19-201ENST00000516016 252 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 RNA5SP236-201ENST00000516169 116 ntBASIC3.36□□□□□ -1.87
USP17L3A6NCW0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP17L3A6NCW0 RNU6-1084P-201ENST00000362498 107 ntBASIC3.35□□□□□ -1.87
USP17L3A6NCW0 SNORD115-3-201ENST00000363100 82 ntBASIC3.35□□□□□ -1.87
USP17L3A6NCW0 snoU2-30.1-201ENST00000365012 70 ntBASIC3.35□□□□□ -1.87
USP17L3A6NCW0 MIR518F-201ENST00000384973 87 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms